Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02787 ATGCAAATATGCAATGCCCTGCCCTGCCCTGGGAAGTATCAACATTTTTCTGATAAAGACAAGATTAATAAGGACGGCAAAGCACCAACAAATTCTGCTGCATTACAAAAACAGTTCATGGCTGCGGCAGCAACACCAACCACATTTGCCGCATCGACTGTTGCTCCTCCTACTCATACTGATACTACCACTGCAACCGCTGCTAATTCCAGCCTCCAAAACCAATCCTCTGTTAAAAAGTCCAAATTGCACAAGTATTCTGAAACTACCACTCCATCCTCCTCCGCCGCCACCGCCACCAACACCAACGGTAACAATCATTCTCCCACCACCTCCATCGTCGATCAAACGTCACGCCACAGCAACTTTGACCCACTCACCGTTGTTGCCTCTCGGAAATCTTGGTGTTGCCGTGCTTCTCCCAACCACATCGCATCACAACTAACTCAATCGCAATCGCATTCTCTGGCCCAAGCCCACTCACGTCGTTCAGATTACAGATTAAGTACACCTGTGCTTGCAAGCCCGAATAGAGAACTCGACTATCCCGCAAGCCCTTCGTCACTTTCGTCATCAACCGCCGACTCGTCTTGCACGCATAGGATCCGTTTCTCTCCCGGCAGACTATTACCAGTCATGGATTTCACTTGCACTCCGACTACACACGCCAGCACCAACGCTGCTGTTAATAGTCACACTGATAACGAGCTTTACCCATCTTGCTTCAATAAATTCAACTCTGCTCTCACTGCCGGTCTATTAAACCCACTGTCTCCTCCTCCTCTATACGAAAAAACTCGATCGAGCCCAACGCTTTTCGAAATGATGGCTAGCGAGCCTGATGTCCACCCCAAACCTCAGATCTCTCCTAACAATGTTGGTGTATCGGTGCAAGGACCACAAATTGTTACGCCAGATAGGCAGGCCTCGACGATCCAACGAATTTCGGATATCTTGGCCACTCGAAGTCCTGGAAACCAATTTAACGATCAAACCACTAGTGATATCAAGCTCACTGTAAGTTCTAAAGATGGCATCCGTGTTTCCATGAACGTCCACTGCCAAATACTCGTTGCACATAGCAGATTCTTCGCTGTGAAACTATCCAATTGTGGGTCTAAACAAAAGCGTCCAACATTGCCTTACACTGTGGAGATTGCTGACTGTGATGATGTGGAAATTTACATCGAGACATTAAGGTTGATGTACTGCAATGATCTCAGGAAGAAGCTAATGAAAGAGGAAGTTTCCAGAGTACTTGAGATCCTCAAGGTGAGGTGCTTTCTCCGTTTTTATCTGTGGTTATTTGGAATGGGTCCACTCAGTTTGTTTCATCTAATAGGCACTGTAGGATTGGAGGTTAAATTATTTGAGATAACTATGTTGAAAATGTTTGCCTACTGGTTACTGGTCGTGTATTCTCGCTTTTCTATATTATGA 1440 0.4604 MQICNALPCPGKYQHFSDKDKINKDGKAPTNSAALQKQFMAAAATPTTFAASTVAPPTHTDTTTATAANSSLQNQSSVKKSKLHKYSETTTPSSSAATATNTNGNNHSPTTSIVDQTSRHSNFDPLTVVASRKSWCCRASPNHIASQLTQSQSHSLAQAHSRRSDYRLSTPVLASPNRELDYPASPSSLSSSTADSSCTHRIRFSPGRLLPVMDFTCTPTTHASTNAAVNSHTDNELYPSCFNKFNSALTAGLLNPLSPPPLYEKTRSSPTLFEMMASEPDVHPKPQISPNNVGVSVQGPQIVTPDRQASTIQRISDILATRSPGNQFNDQTTSDIKLTVSSKDGIRVSMNVHCQILVAHSRFFAVKLSNCGSKQKRPTLPYTVEIADCDDVEIYIETLRLMYCNDLRKKLMKEEVSRVLEILKVRCFLRFYLWLFGMGPLSLFHLIGTVGLEVKLFEITMLKMFAYWLLVVYSRFSIL* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02787 479 ProSiteProfiles BTB domain profile. 334 411 IPR000210 GO:0005515
Pte1g02787 479 MobiDBLite consensus disorder prediction 87 118 - -
Pte1g02787 479 Pfam BTB/POZ domain 327 422 IPR000210 GO:0005515
Pte1g02787 479 MobiDBLite consensus disorder prediction 147 197 - -
Pte1g02787 479 MobiDBLite consensus disorder prediction 147 171 - -
Pte1g02787 479 PANTHER OSJNBA0011J08.25 PROTEIN-RELATED 317 431 IPR038920 -
Pte1g02787 479 Gene3D Potassium Channel Kv1.1; Chain A 312 431 IPR011333 -
Pte1g02787 479 MobiDBLite consensus disorder prediction 181 197 - -
Pte1g02787 479 MobiDBLite consensus disorder prediction 53 80 - -
Pte1g02787 479 MobiDBLite consensus disorder prediction 53 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02787 Pte-Chr1 47619274 47620713 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pte1g02787 BTB 0.00033 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02787 - - qsa:O6P43_024150 328.176