Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02782 ATGGGAGGTTGCTGCTGTTGTCCTTACAAAGCAGCGGTTTTGATTGGCGACCCAACTTACTGTCATCATCCGAGAGTTGCAGGGGAGCATGTTCAGATTTCATCTCACCATGTTGCTGCCTCTACTCTGTCAGGGGGTCTTCTAGTAGATACAAATCTAGATATTTCAGTTCCTGATACCTATAGAACACCACCAGCTCCTATTCCCTATGATATGACTGTGGGTGTACCTCAAACTCCACCCGTTGCTCAAGAAATGCATGGAAACAAGTTTAGTTTTGTTCTGAGTTCTTCAAATTCTACTCCAGTTCAAGCTGCTCTGTCAGATAAGAACAATGGGACTTCTATGAAGTCTGAAGACCTAAAGGAATCGGAGCACAAGGTTCATGATGATCCAAAGTTTGGTTCCGCTAAAGAGTCAGAAGGTGAGCTCTCAAAGTCAGCTGAATCTATTGTCTCAGTTGTGGAAGAGGAGGATGCATGCCCCATCTGTTTGGAAGAGTATGATGCAGAGAATCCAAAACTGGCTACAAAATGTGAGCATCATTTTCACCTTGCGTGTATTCTTGATTGGATGGAAAGAAGTGAAAGGTGTCCTGTGTGTGATAAGGTCTGCTTTGGTCCTTTTATTTTTATTTTCAATTTTCAGTTGTCCTAA 657 0.4277 MGGCCCCPYKAAVLIGDPTYCHHPRVAGEHVQISSHHVAASTLSGGLLVDTNLDISVPDTYRTPPAPIPYDMTVGVPQTPPVAQEMHGNKFSFVLSSSNSTPVQAALSDKNNGTSMKSEDLKESEHKVHDDPKFGSAKESEGELSKSAESIVSVVEEEDACPICLEEYDAENPKLATKCEHHFHLACILDWMERSERCPVCDKVCFGPFIFIFNFQLS* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02782 218 SMART ring_2 161 201 IPR001841 -
Pte1g02782 218 MobiDBLite consensus disorder prediction 115 142 - -
Pte1g02782 218 FunFam Putative E3 ubiquitin-protein ligase RHB1A 137 206 - -
Pte1g02782 218 CDD RING-H2_AIRP1-like 157 204 - -
Pte1g02782 218 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 35 204 - -
Pte1g02782 218 Pfam Ring finger domain 160 201 IPR001841 -
Pte1g02782 218 SUPERFAMILY RING/U-box 155 206 - -
Pte1g02782 218 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 132 212 IPR013083 -
Pte1g02782 218 MobiDBLite consensus disorder prediction 103 142 - -
Pte1g02782 218 ProSiteProfiles Zinc finger RING-type profile. 161 202 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02782 Pte-Chr1 47590571 47594334 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02782 1 203 C3H Transcription Factor Family AT5G41350 43.478 4.99e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02782 - - qsa:O6P43_034261 270.011