Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02776 ATGAGGATGATGGAGAAGAGGTTATACACATCGCCAAACACTGTTAGAATTGTTGCAATTTCATTGTCTACGGTACGAAGTTGGACTTTGGAGAAGACTCCCAGCCTCGATAGTGTTAACCCGACGAACAGGTCTGTGAAGTCATTGAGTAGCAACAGACCTGTTCGATTTGCGTTGAGGGTGGGAGTCTTTGCCAAGGTTCTGCATCGTAAAAATAGAAGGTATTTCGGGTTAACAGCCACAGCACATACCCAAATTCTAAGAACACGTACCTGTTCATCTACACCAAGGTCCCTGCAATTTGTTACAGCAACGACAGTCTGCACACTTCGGCTTCAAAGACCCGTGGACGATTACAGACCAGAGTGGCTTCACAGACCTGTCGTCAAGTTCACGATGGCCGCTGGGTTTCAGAGTCAGTCAAGTGTGCCAGAGGACTTGAAGAAACAGCTTGCCATAACCGTGAGAAGCATTCGATGGAGCTACGACATCTTCTGGTCGATTTCAGGAGGAAAACCAGGGGCGTTGATGTGGAGGAGTGGATATTACAATGGAGAAATTAAGACTAGGAAAACCATGGACCAATCAGAAGAAGAACCAAATGCGGAGCAATTAGGTGTGCAGAGGAGTGAGCAGCTGAGAGAACTGTTTGAGTTTTTGTCAGGTGGTGAAGCCAACCGACAAGGAAGAAGGCTCTCGGTTGCATTAGCACCTGAAGATCTCACAGACACCGAGTGGTATTACTTGGTTAGCATGTCTTTTGTGTTCGGCATTGGTGAAGGGTTGCCTGGAAGAACTTTGGCCAATGGTGAACCGCTTTGGATCTGTAACGCCCATCTTGCTGATAGAAAAACTTTTTGTCGCTCATTGCTTGCAAGGACAGTGGTGTGCTTTCCATTCTTGGAAGGTGTGATCGAGATCGGTATGACTGATTTGGTCTTGGAAGATCCGAGGCTCGTTCATCGGATGAAAGTTTCATTGTTGGAAGTTGCCAATAGTACCTACACTGTGACCTCATTCAATACTCCAGTACGGAACATGACATCTCGAAATATCGATCGTTCAGATGACCTACTTCAAGACTATCTTCAACCAGTAGATGTAGAAAAGTCTCTGATGATGCTTGAGTTTGAGACTAACGTGACGAATATGGGTGACCCGTCTCTGGTAAAAATCTGGCATGTTAATGTTACGCATGATGAGTTTCTGAAGTGCGTCCACGATTCCATGAATTCTGAAAATAATAGTGAACCCTCTATTCAGGATGTTGAAAATCTTCAAGACGATTCTAATTGCAATGATCAGAGGAGATCAATCACGTCGACCAGCAGCTTGTTGGAACTTCCACCATGTACAAGTACAGGTGATGATGAACATCGTCACCATTTGCATTATCAGAGTGTTGTTTCTACCATTCTTAAAACTTCTCACCAATTCATTCTAGAACCACATTTCCGAAGTTGTCTTGGTCAGGGATCATCAAGCTTTGTTTGGTGGGAGGAAGGACGACGGCTGCTTAGTCACCCATCCCATCATCAGAAGCCTGCTGGGGTAGGAGCCTCACAAGAAGTACTAAAGTGGGTCTTGTGTAAATTGCCCCAAATGCACCGGGCTCGCCTCCTTGAATCTAGATATCCAAATCGCAACAATAGAACCCAAATTAGATCAGACGCGGGTGAAATTATTGAGAATCCTGTTATTTGCAAATCCGGAAACGGAAGGGAGAAAAAGAAGGAAATGTTGTCTGGTCTCAGGTCGTTTGTCTCATCAAAAGATAAGGATGAGAAACTCTCAGCACTAGAAGAAACAATAGAGTATGTGGAGGAGCTCGGAAGAAGGGTTGATGGATTGGAAGCTAGCTTTGGTAGATTAAAAGAAATACGCCATGATTTACCAGAGTCTCCTAGTTCTGACTGTGATGGTTATCGAATAAATTTGGATGCTGGGAAAAGACCACTTGCAAAAACAAACAAAAGAAAGGCTCCCGTAGCATGGAGCAACAGTCACTTGGGAGGTGATGCCCGCGGTAATAAGACCCATGACGATGTACCTGCCAATGCCAATGGTCGTTGCACAAGCCATGTTGTCGTGACTAAGACCCATGACGATGAAATTGTGATAGAATTGAAATGTTCTTGGAGAGAAGGACTGCTCCTTGAGGTTATGCAAGTCCTAAGCAATTTCGATTTAGATTTCCATTCAGTTCAGTCGTCCAATTCCAGTGACGTATTACTCTTAATCGTTAAATTCAAGATCATGACTCCTCCAACTCTTCAATCGGCCGCTAAAATCAAGCACGCACTTCATGGAGTTGCTTTGAAGTGTTGA 2328 0.445 MRMMEKRLYTSPNTVRIVAISLSTVRSWTLEKTPSLDSVNPTNRSVKSLSSNRPVRFALRVGVFAKVLHRKNRRYFGLTATAHTQILRTRTCSSTPRSLQFVTATTVCTLRLQRPVDDYRPEWLHRPVVKFTMAAGFQSQSSVPEDLKKQLAITVRSIRWSYDIFWSISGGKPGALMWRSGYYNGEIKTRKTMDQSEEEPNAEQLGVQRSEQLRELFEFLSGGEANRQGRRLSVALAPEDLTDTEWYYLVSMSFVFGIGEGLPGRTLANGEPLWICNAHLADRKTFCRSLLARTVVCFPFLEGVIEIGMTDLVLEDPRLVHRMKVSLLEVANSTYTVTSFNTPVRNMTSRNIDRSDDLLQDYLQPVDVEKSLMMLEFETNVTNMGDPSLVKIWHVNVTHDEFLKCVHDSMNSENNSEPSIQDVENLQDDSNCNDQRRSITSTSSLLELPPCTSTGDDEHRHHLHYQSVVSTILKTSHQFILEPHFRSCLGQGSSSFVWWEEGRRLLSHPSHHQKPAGVGASQEVLKWVLCKLPQMHRARLLESRYPNRNNRTQIRSDAGEIIENPVICKSGNGREKKKEMLSGLRSFVSSKDKDEKLSALEETIEYVEELGRRVDGLEASFGRLKEIRHDLPESPSSDCDGYRINLDAGKRPLAKTNKRKAPVAWSNSHLGGDARGNKTHDDVPANANGRCTSHVVVTKTHDDEIVIELKCSWREGLLLEVMQVLSNFDLDFHSVQSSNSSDVLLLIVKFKIMTPPTLQSAAKIKHALHGVALKC* 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02776 775 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 147 324 IPR025610 -
Pte1g02776 775 MobiDBLite consensus disorder prediction 410 434 - -
Pte1g02776 775 MobiDBLite consensus disorder prediction 657 685 - -
Pte1g02776 775 PANTHER TRANSCRIPTION FACTOR TT8 138 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02776 Pte-Chr1 47551250 47556818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02776 132 776 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 37.300 4.11e-115 360
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02776 - - cave:132175948 421.779