Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02761 ATGGCTTCCTCGTCAAACAACAGCTACGACATACCTTGGGTAGAGAAATACCGACCCAGCAAGGTAGCTGACATCGTAGGCAACCAGGACGCAGTCTCCAGGCTTCAAGTCATAGCTCGCGATGGCAACATGCCTAACCTCATTTTGTCCGGACCTCCTGGAACTGGAAAAACGACAAGCATACTTGCTCTTGCACATGAACTTCTGAGTTTAAATTTCAAGGAAGCCGTTTTAGAGTTGAATGCCTCAGATGATAGAGGAATAGATGTTGTGAGGAACAAGATTAAAATGTTTGCACAGAAGAAAGTTACGCTGCCTCCTGGAAGGCACAAGATTGTGATATTAGATGAGGCAGACAGCATGACATCAGGAGCACAGCAAGCTTTGAGAAGGACGATGGAAATATATTCAAACTCCACTCGTTTTGCGCTGGCATGCAATACATCTTCTAAAGTCATTGAGCCGATTCAAAGTAGATGTGCTATAGTTCGATTCTCAAGATTATCTGATCAGGAAATACTTGGTCGTCTGATGGTAGTTGTTGACGCCGAGAAGGTTGCCTATGTTCCAGAAGGCCTTGAAGCTATAATTTTCACAGCTGATGGTGACATGAGGCAAGCTTTGAATAATTTGCAAGCTACATTCAGTGGATTCCGATTTGTCAATCAAGAAAATGTTTTCAAGGTTTGCGACCAGCCCCATCCATTGCACATTAAGAATATCGTGCGAAATGTCATTGAAGGAATGTTTGATGAGGCTTGTGTGGGTCTTAAGCAACTCTATGATTTGGGATACTCCCCCACTGACATAATTACAACACTTTTTCGAATAATCAAGAATTATGACATGGCTGAATATCTCAAATTGGAATTTATGAAGGAAACTGGATTTGCACATATTAGGATTTGTGACGGAGTTGGTTCATACCTTCAGCTTTGTGGTCTTTTGGCGAAGCTTGCTCTCGTACGTGAAACTGCCAAAGCTGCATAA 990 0.4253 MASSSNNSYDIPWVEKYRPSKVADIVGNQDAVSRLQVIARDGNMPNLILSGPPGTGKTTSILALAHELLSLNFKEAVLELNASDDRGIDVVRNKIKMFAQKKVTLPPGRHKIVILDEADSMTSGAQQALRRTMEIYSNSTRFALACNTSSKVIEPIQSRCAIVRFSRLSDQEILGRLMVVVDAEKVAYVPEGLEAIIFTADGDMRQALNNLQATFSGFRFVNQENVFKVCDQPHPLHIKNIVRNVIEGMFDEACVGLKQLYDLGYSPTDIITTLFRIIKNYDMAEYLKLEFMKETGFAHIRICDGVGSYLQLCGLLAKLALVRETAKAA* 330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02761 329 CDD HLD_clamp_RFC 168 230 - -
Pte1g02761 329 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 12 313 - -
Pte1g02761 329 FunFam Replication factor C subunit 4 5 168 - -
Pte1g02761 329 FunFam Replication factor C subunit 4 169 232 - -
Pte1g02761 329 SUPERFAMILY post-AAA+ oligomerization domain-like 232 323 IPR008921 GO:0003677|GO:0006260
Pte1g02761 329 SMART AAA_5 43 175 IPR003593 GO:0016887
Pte1g02761 329 Pfam ATPase family associated with various cellular activities (AAA) 47 165 IPR003959 GO:0005524|GO:0016887
Pte1g02761 329 Gene3D - 169 232 - -
Pte1g02761 329 CDD AAA 26 163 - -
Pte1g02761 329 Gene3D - 4 168 IPR027417 -
Pte1g02761 329 Gene3D - 233 325 - -
Pte1g02761 329 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 9 231 IPR027417 -
Pte1g02761 329 FunFam replication factor C subunit 2 233 325 - -
Pte1g02761 329 Pfam Replication factor C C-terminal domain 233 318 IPR013748 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02761 Pte-Chr1 47455628 47458906 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02761 7 330 Core DNA Replication Machinery Family AT1G63160 91.049 0.0 620
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02761 K10755 - qsa:O6P43_034206 608.601