Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02750 ATGGATGTGATTCCGTCCATGTTCGAATTCGATCTGACTGATGAGCTGTTTCAAACTTTTTCCTATCCCTGCCAACCCTATTCACCGCAGGAAGAAGAAACATACCTACTGTACTCCCCACGACAAGAAGAAGCACACCCACTGCCACTGAGCTCCCCACGACAAGAAGAAACGAAGCTTCCTTCTCCGACTGATCAGCCGGTTGGCAAACAACTGTGCACTGATAATCAGCCGGCGTCTGGTGGCCGTCACCGTCGTCGGCGTAAAGCATCACATGGTTCAGCTGAGGTGAATGATGACTGTCCTGCTGAAACTAAAAAGAGGAAGATAATGCATAGAGATATTGAGCGACAAAGAAGGCAGGAAATGACCACTCTTTATGCCTCTTTACGATCACAACTCCCTCTTGAATACCTAAGGGGGAAGCGTGCTATATCTGATCACATGTACCAAGCAGTCAATTATATAAAGCATCTACAGAGAAACATCCAAGAGCTGAGTCATAAGAGAGATGAGCTGCTCAGAAATATGACAGACTATTCTCCTTCCAACAATAGTGGGTCGGACAATTTGCAAGGCTCCACAGTGCAGGATTCTTTGAAAATTACGCCTTGTTCAAATGGAATTGAAGTCACCATAAATACTGCTCTATCAGGAGGGATTCCTCTCTCAAGAGTACTTGGAATTCTAATTGAAGAAGGCTTCAGCATTGTCAGTTGCATCGCAACTAAAGTACATGAGAGGTTGCTTCACACCATTAAATCAGAGGCGAGTCATGGAAGAACCATCCAACCATCTGAACTACATCAGAAACTGACCAAAACTTTGATAAGATCTCACAATGGAATTTGA 852 0.4437 MDVIPSMFEFDLTDELFQTFSYPCQPYSPQEEETYLLYSPRQEEAHPLPLSSPRQEETKLPSPTDQPVGKQLCTDNQPASGGRHRRRRKASHGSAEVNDDCPAETKKRKIMHRDIERQRRQEMTTLYASLRSQLPLEYLRGKRAISDHMYQAVNYIKHLQRNIQELSHKRDELLRNMTDYSPSNNSGSDNLQGSTVQDSLKITPCSNGIEVTINTALSGGIPLSRVLGILIEEGFSIVSCIATKVHERLLHTIKSEASHGRTIQPSELHQKLTKTLIRSHNGI* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02750 283 SMART finulus 113 165 IPR011598 GO:0046983
Pte1g02750 283 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 105 182 IPR036638 GO:0046983
Pte1g02750 283 CDD bHLH_AtORG2_like 108 175 - -
Pte1g02750 283 Pfam Helix-loop-helix DNA-binding domain 108 160 IPR011598 GO:0046983
Pte1g02750 283 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 88 274 - -
Pte1g02750 283 MobiDBLite consensus disorder prediction 43 105 - -
Pte1g02750 283 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 107 159 IPR011598 GO:0046983
Pte1g02750 283 FunFam Transcription factor bHLH126 99 187 - -
Pte1g02750 283 MobiDBLite consensus disorder prediction 55 78 - -
Pte1g02750 283 Gene3D - 99 185 IPR036638 GO:0046983
Pte1g02750 283 Coils Coil 156 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02750 Pte-Chr1 47394252 47395379 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02750 104 257 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G51790 47.771 7.96e-41 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g02750 HLH 1.7e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02750 - - qsa:O6P43_024256 224.172