Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02730 ATGGAGTTAAAGTCATCTCTGGATCCTGACAACAAGATCCTCACCTCTTGGATCAGTGACGTTGATCCATGCAGTGGTTCTTTTCTAGGAGTGGCCTGCAACGAGCAGCAGAGAGTGGCCAATATTTCTTTGCAGGGAAAAGGTCTCTCAGGCTGGATTTCATCCGCTGTGTCTAAACTTAAATGCCTTTCGGGACTTTACCTGCATTATAACAATCTGTCTGGAGAGATACCCAAAGAGATTTCCATTCTCATTGAACTCGCCGACTTATATCTAGACGTCAATAATCTCAGTGGAATTCTTCCTACTGAGATTGGGAACATGGCCAGTCTTCAAGCTTTACAGCTCTGTTGTAACAAGCTGACCGGGGATATACCCACAGAGATAGGTTCATTGAAGCGGTTGACTGTTCTTGCTTTACAGAATAACAGGCTAACCGGTCAGATTCCTTCAAGTTTAGGGAACTTTGGAACGCTGACAAGGCTAGATTTGAGCTTTAACAATCTAATTGGATCAATTCCTGCCAGATTAGCTGAAAATCTGCAGCTCAAATTTTTTAATGTTCAAAACAATTCTCTCTCTGGAAGGTTCCCCCTTGTATGCCTCTTTTGCCGACCTCTGTTTAGTCCATCTCCACTAGTTAGTTCTGGATATTCTAATCTCTGGGGTACAAATGGAGCTGAGTCGTCATCCAATGAATTCCTGAATCAATTTAGGTGCAACATGGACGAGGTTGAATCTGCCACACAATATTTCTCAGAGGTAAATTTGTTGGGGAAGAGCAACTTCTCAGCTTTCTATAAAGGAACTCTAAGGGATGGTTCTCTTGTTGCAATAAGGAGTGTCCATATAAGTTGCTGTAAATCAGAGCAAGCTGAATTCATAAAAGGATTAAACTTGTTAACCTCACTCAGTCACGGCAACCTTGTGCGTTTGAGAGGTTTCTGTTGCTCAGGGAGCAGGGGTGAATGTTTTCTTATCTATGACTTTGTTCCCAAAGGAAACCTGTCACAGTATATAGACATTGAAGATGGAAGTAAAGAATCACTTGATTGGTCCCAAAGATTTTCTATCATCAATGGCATTGCAAAAGGTATTGGATATTTACACAGCAGTGAAGGCGGCAAACCTTCCATAGTACACCGGAATATGTCCATTGAGAAAGTACTCCTCGATCAGCATTTTAATCCATTGATTATGGACTCGGGTCTCCCTAAGCTTCTTGCTGATGATGTTGTGTTCTCAACCTTAAAAGTCAGTGCAGCAATGGGATACCTTGCTCCAGAGTATATTACAACTGGCCGCTTTACTGAGAAGAGTGATATATATGCATTTGGGGTTATTGTTCTTCAAGTTCTTAGTGGGAAAGCAAACATAGGTGGCTCAATTAGAAAGGCAGCTGAATCTTCAAGATTTGACGATTTTGTGGATACAAACCTCAATGGAAAATATTCAAAATCTGAAGCAGACATGCTGGGCAAAATCGCATTACAATGTACCCACGAGCGTCCTGACGAGAGACCAGAAATGGAAGAGGTTATCATGGAGCTGAGCAATTTTTCTGCAAAATGA 1572 0.4173 MELKSSLDPDNKILTSWISDVDPCSGSFLGVACNEQQRVANISLQGKGLSGWISSAVSKLKCLSGLYLHYNNLSGEIPKEISILIELADLYLDVNNLSGILPTEIGNMASLQALQLCCNKLTGDIPTEIGSLKRLTVLALQNNRLTGQIPSSLGNFGTLTRLDLSFNNLIGSIPARLAENLQLKFFNVQNNSLSGRFPLVCLFCRPLFSPSPLVSSGYSNLWGTNGAESSSNEFLNQFRCNMDEVESATQYFSEVNLLGKSNFSAFYKGTLRDGSLVAIRSVHISCCKSEQAEFIKGLNLLTSLSHGNLVRLRGFCCSGSRGECFLIYDFVPKGNLSQYIDIEDGSKESLDWSQRFSIINGIAKGIGYLHSSEGGKPSIVHRNMSIEKVLLDQHFNPLIMDSGLPKLLADDVVFSTLKVSAAMGYLAPEYITTGRFTEKSDIYAFGVIVLQVLSGKANIGGSIRKAAESSRFDDFVDTNLNGKYSKSEADMLGKIALQCTHERPDERPEMEEVIMELSNFSAK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02730 523 Gene3D Phosphorylase Kinase; domain 1 221 330 - -
Pte1g02730 523 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 33 - -
Pte1g02730 523 Pfam Leucine rich repeat 86 145 IPR001611 GO:0005515
Pte1g02730 523 Pfam Protein tyrosine and serine/threonine kinase 256 517 IPR001245 GO:0004672|GO:0006468
Pte1g02730 523 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 240 519 - -
Pte1g02730 523 FunFam Protein NSP-INTERACTING KINASE 2 331 521 - -
Pte1g02730 523 SUPERFAMILY Protein kinase-like (PK-like) 229 517 IPR011009 -
Pte1g02730 523 ProSiteProfiles Protein kinase domain profile. 252 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02730 523 Gene3D Ribonuclease Inhibitor 1 143 IPR032675 -
Pte1g02730 523 SUPERFAMILY L domain-like 8 202 - -
Pte1g02730 523 Pfam Leucine rich repeat N-terminal domain 2 34 IPR013210 -
Pte1g02730 523 FunFam Protein NSP-INTERACTING KINASE 2 1 142 - -
Pte1g02730 523 Gene3D Ribonuclease Inhibitor 144 202 IPR032675 -
Pte1g02730 523 FunFam Protein NSP-INTERACTING KINASE 2 223 330 - -
Pte1g02730 523 Gene3D Transferase(Phosphotransferase) domain 1 331 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02730 Pte-Chr1 47295210 47297997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02730 208 365 Miscellaneous Gene Families AT4G22730 55.357 2.10e-50 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IV Pte1g02730 PK_Tyr_Ser-Thr 3.5e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02730 - - adu:107488203 572.007