Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02715 ATGGATTGGAAAAATCAGCAGCATCAACCATCAGTGCAGCAGATAGATCAGCAGCAAACAAGTGCAAATGCGGCTGTTGGTGGGTTACCATACGTGACGGTGATGACCGACGAACAGATGGAAATCCTTAGGCGACAGATCGCCGCCTACGCTACGATATGTGAGCAGCTTGTTGAGATGCACAAGGCCATGACCACTCAACATGATATTGCAGCATGGAGGCTGGGTAACATATACTGTGATCCACTAATGGCATCTTGTGGCCACAAGATAACGGCCAGACAGCGTTGGACTCCAACGCCAGTGCAGCTGCAAATCCTGGAGCGTATTTTCGATGAAGGGAATGGTACTCCAAGCAAGCAGAAGATCAAGGAGATAGCCATCGAACTGGGACAACATGGACAAATTTCTGAAACTAACGTCTATAATTGGTTCCAGAACAGAAGGGCTCGTTCAAAGCGGAAGCAAATGAATCCAACTGGAGCTGCAAACAACGGAGAATCAGAGGCGGAGACTGAAGTTGATTCTCCGAAAGACAAGAAGGCAAAATCGGAAGCCATTCAATGCTATGAGAATTCGCCTCCACCACGGGCCAAGAATATGTACTTCCAGAGTCCTGGAACAGGTAAGGTACCAAAAATGTGTGCCTGCTGGTGCCTTTATTATTTTACAAAATCACGTTCATTCCCTATTATCAGTATTTTATTTTTTTTGCCTTTTCAGTTTGCACACCGGAAGATTCTGTCAGATCACCTTTTGAGTCATTAG 768 0.4583 MDWKNQQHQPSVQQIDQQQTSANAAVGGLPYVTVMTDEQMEILRRQIAAYATICEQLVEMHKAMTTQHDIAAWRLGNIYCDPLMASCGHKITARQRWTPTPVQLQILERIFDEGNGTPSKQKIKEIAIELGQHGQISETNVYNWFQNRRARSKRKQMNPTGAANNGESEAETEVDSPKDKKAKSEAIQCYENSPPPRAKNMYFQSPGTGKVPKMCACWCLYYFTKSRSFPIISILFFLPFQFAHRKILSDHLLSH* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02715 255 CDD homeodomain 94 156 IPR001356 GO:0003677
Pte1g02715 255 SUPERFAMILY Homeodomain-like 93 156 IPR009057 -
Pte1g02715 255 Pfam Homeodomain 94 154 IPR001356 GO:0003677
Pte1g02715 255 PANTHER WUSCHEL-RELATED HOMEOBOX 13 1 209 IPR044559 GO:0003700
Pte1g02715 255 MobiDBLite consensus disorder prediction 152 185 - -
Pte1g02715 255 MobiDBLite consensus disorder prediction 171 185 - -
Pte1g02715 255 ProSiteProfiles 'Homeobox' domain profile. 90 155 IPR001356 GO:0003677
Pte1g02715 255 Gene3D - 96 159 - -
Pte1g02715 255 SMART HOX_1 92 159 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02715 Pte-Chr1 47161939 47164319 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02715 1 206 Wox Gene Family AT4G35550 54.626 1.16e-70 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte1g02715 Homeodomain 1.4e-18 CL0123