Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02714 ATGAAAGGTGGAAGGTCAAAGAGCGAATCCAAGAAGGCCGATGCTAAGCTTGCTGTGAATAAGAAAGCAACTACCAAAGGTGGGAGGAAGGCAGCTAAGGGTAAGGCAGCAAAAGATCCAAACAAGCCAAAGAGGCCTGCCAGTGCCTTCTTCGTATTCATGGAGGATTTCAGGAAACAATTTAACAAGGACAATCCTGGAAACAAGGCAGTATCTGCTGTTGGTAAAGCTGCTGGAGCTAAGTGGAAGTCGATGTCTGATGCTGACAAAGCACCTTATGTTGCAAAGGCCGAGAGGCGCAAGGTTGATTACGAAAAGGAAATAAAAGATTATAACAAGAGACAGGCTGAAGGTACCCATGCAGCTGATGAGGAATCTGACAAGTCAGTATCTGAGGTGAATGATGAAGACGAGGGAGATGAGGAAGGCAGTGATGAGGATGATGACGAGTAA 453 0.4592 MKGGRSKSESKKADAKLAVNKKATTKGGRKAAKGKAAKDPNKPKRPASAFFVFMEDFRKQFNKDNPGNKAVSAVGKAAGAKWKSMSDADKAPYVAKAERRKVDYEKEIKDYNKRQAEGTHAADEESDKSVSEVNDEDEGDEEGSDEDDDE* 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02714 150 MobiDBLite consensus disorder prediction 1 47 - -
Pte1g02714 150 MobiDBLite consensus disorder prediction 77 150 - -
Pte1g02714 150 SMART hmgende2 42 113 IPR009071 -
Pte1g02714 150 ProSiteProfiles HMG boxes A and B DNA-binding domains profile. 43 112 IPR009071 -
Pte1g02714 150 Gene3D High mobility group box domain 27 129 IPR036910 -
Pte1g02714 150 PANTHER HIGH MOBILITY GROUP B PROTEIN 4-RELATED 1 145 IPR031061 -
Pte1g02714 150 MobiDBLite consensus disorder prediction 129 150 - -
Pte1g02714 150 MobiDBLite consensus disorder prediction 1 19 - -
Pte1g02714 150 CDD HMG-box_AtHMGB1-like 44 104 - -
Pte1g02714 150 SUPERFAMILY HMG-box 30 120 IPR036910 -
Pte1g02714 150 Coils Coil 94 114 - -
Pte1g02714 150 Pfam HMG (high mobility group) box 43 112 IPR009071 -
Pte1g02714 150 MobiDBLite consensus disorder prediction 92 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02714 Pte-Chr1 47159122 47161193 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR HMG Pte1g02714 HMG_box 3.8e-23 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02714 K25507 - qsa:O6P43_016371 187.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02714 1 47159122 47161193 Pte1g02714 1 47159122 47161193 RCT