Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02682 ATGGCCTCTGCTTCAACACTCTCATCTCTCGGCGTCGTCAGCTCATTTTCTTCTGCCTCGTTTTGCTGTCATCTTGAAGGTCGTCGTTTTACTTCTGTCCGATTTCACAGTCCCTTCCGAATCTCTGCCGCGGAGCGGACAGCCCTGACATCCCAGCTTCAGGATTCATCACCGGGGTCGCTCTATGAGGTTCTTGGGATTGAAATGGGCGCTTCATGTCAGGAGATCAAGGCCGCTTATAGAAGATTGGCCAGGGTAGTCCACCCAGATGTGGCTGCCACGAGCACTCATAAGAGAAAAGGTCGAGCATCAACTGTTAGTTTCGGAGCAGGAGATTTCATAAAGGTCCATGAAGCCTACACCACTTTGTCTGATTCGGTTAAACGTGCTCATTACGACCGTATTCTTTGCGCCCGGAGTAGGAGACACAGCTCGCGTCCCACCTTGACGACGGGATCATCAGGATATAGATGGAGAAAATGGGAAACAGATCAGTGCTGGTAG 504 0.5099 MASASTLSSLGVVSSFSSASFCCHLEGRRFTSVRFHSPFRISAAERTALTSQLQDSSPGSLYEVLGIEMGASCQEIKAAYRRLARVVHPDVAATSTHKRKGRASTVSFGAGDFIKVHEAYTTLSDSVKRAHYDRILCARSRRHSSRPTLTTGSSGYRWRKWETDQCW* 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02682 167 SMART dnaj_3 59 128 IPR001623 -
Pte1g02682 167 Pfam DnaJ domain 61 133 IPR001623 -
Pte1g02682 167 PANTHER CHAPERONE PROTEIN DNAJ 11, CHLOROPLASTIC-LIKE 30 167 - -
Pte1g02682 167 SUPERFAMILY Chaperone J-domain 60 139 IPR036869 -
Pte1g02682 167 CDD DnaJ 62 125 IPR001623 -
Pte1g02682 167 Gene3D DnaJ domain 45 153 IPR036869 -
Pte1g02682 167 PRINTS DnaJ domain signature 80 95 IPR001623 -
Pte1g02682 167 PRINTS DnaJ domain signature 62 80 IPR001623 -
Pte1g02682 167 PRINTS DnaJ domain signature 108 128 IPR001623 -
Pte1g02682 167 ProSiteProfiles dnaJ domain profile. 60 136 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02682 Pte-Chr1 46948182 46948685 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02682 62 133 C2H2 Transcription Factor Family AT1G74250 38.889 2.45e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02682 - - jre:109000891 129.413