Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02663 ATGTCTGACTCGATCGCCATGGATAAAACACTTTCCAGCAAATTTGAAGGAAAGCCCATTTGGTGCAGAGCTGCGGTTTCTCGCGCACCAGGTGAACCGTTGGTGATCGAGGAGATCATGGTGGCACCGCCCATGCCACATGAAGTTCGGATTAAAATTTTATGCACCTCTCTCTGTCACAGTGATATCACTGTTTGGAAAATGGAGGGTCCTCCTGGAATTGTCCCGAGAATTCTGGGCCACGAGGCCATAGGAGTGGTGGAAAGTGTTGGGAAGGATGTAATTGAAGTGATTCCAGGAGATACTGTTGTTCCAACTTTCCTGCCAGACTGTGGAGATTGCAAAGATTGCTGCTCAAAGAAGAGTAATCTTTGTTCTAAGATTCCTTTCAAGGTGTCTCCCTGGATGCCTAGATACGAGACCAGCAGATTCAGTGATAAAAACGGAGGTCCTATATACCATTTCCTGAACGTGTCAAGTTTTAGTGAGTATACTGTGGTGGACATTGCCCATATAACAAAAATTGACCCTTCTATCCCCCCTAGCATGGCATGTCTTCTCAGCTGTGGAGTATCCACTGGCGTGGGTGCTGCTTGGAGAGCAGCAAATGTAGAGAAAGGATCCACTGTTGCTATATTTGGGCTAGGCTCAATTGGATTAGCAGTTGCAGAGGGAGCAAGACTTTGTGGAGCAAGTAAAATAATAGGTGTCGATGTGAACCCCGAGAAATTTGAAATTGGGAAAAAGTTTGGAGTCACAGACTTCGTCGATGCTAAAGAATCGGTTAGTCAGGTGATCAACGAAATCACTGATGGAGGTGCAGACTACTGCTTTGAATGTGTCGGGATGGCATCAGTAGTTCACGAAGCATATGCTTCCTGTAGAAAGGGATGGGGGAAAACAATCGTGCTGGGGGTAGACAAGCCTGATTCTTCGGTGAGCCTTAACTCTCTTGATGTCATTAACAATGGGAAGAGCCTTGTGGGATGCTTATTTGGAGGACTGAAACCTAAATCTGATATCCCTATTCTCCTGAAGCGTTATATGGATAAGGAACTGCAGCTGGACGATTTTATAACACATGAAATAGGATTTGAGGATATCAACAAATCTTTTGAGCTACTCATTCAAGGGAAATCTCTACGATGCTTGATTTGGATGAACAATTGA 1170 0.4479 MSDSIAMDKTLSSKFEGKPIWCRAAVSRAPGEPLVIEEIMVAPPMPHEVRIKILCTSLCHSDITVWKMEGPPGIVPRILGHEAIGVVESVGKDVIEVIPGDTVVPTFLPDCGDCKDCCSKKSNLCSKIPFKVSPWMPRYETSRFSDKNGGPIYHFLNVSSFSEYTVVDIAHITKIDPSIPPSMACLLSCGVSTGVGAAWRAANVEKGSTVAIFGLGSIGLAVAEGARLCGASKIIGVDVNPEKFEIGKKFGVTDFVDAKESVSQVINEITDGGADYCFECVGMASVVHEAYASCRKGWGKTIVLGVDKPDSSVSLNSLDVINNGKSLVGCLFGGLKPKSDIPILLKRYMDKELQLDDFITHEIGFEDINKSFELLIQGKSLRCLIWMNN* 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02663 389 Pfam Alcohol dehydrogenase GroES-like domain 46 174 IPR013154 -
Pte1g02663 389 Gene3D - 25 382 - -
Pte1g02663 389 Gene3D - 194 330 - -
Pte1g02663 389 SUPERFAMILY GroES-like 16 202 IPR011032 -
Pte1g02663 389 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 179 350 IPR036291 -
Pte1g02663 389 FunFam S-(hydroxymethyl)glutathione dehydrogenase 194 330 - -
Pte1g02663 389 PANTHER ALCOHOL DEHYDROGENASE 17 385 - -
Pte1g02663 389 FunFam Alcohol dehydrogenase 6 25 206 - -
Pte1g02663 389 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 80 94 IPR002328 GO:0008270|GO:0016491
Pte1g02663 389 Pfam Zinc-binding dehydrogenase 218 338 IPR013149 -
Pte1g02663 389 SUPERFAMILY GroES-like 338 386 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02663 Pte-Chr1 46810328 46813122 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02663 48 273 Monolignol Biosynthesis Gene Families AT4G37970 26.295 3.17e-12 65.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02663 K00121 - qsu:112018306 608.216