Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02651 ATGGCAGACAATTGCTCAAATGATGGTTCTAGTACTAGCAATCTTTCTGCTGGAGGCTCAGACTCTACAGTTCAGATCAATATCAAGACCCTGAATTCTCATATTTATACCTTTCAAGTGGATAAAAAGATGCCGATTTCATCATTCAAGGAGAAAATAGCAAATGAAATTGGTCTTCCAGTTAATCAGCAACGGTTGATTTTCAGAGGGAAAGTGTTAAAAGATGAGCATCTTCTTTCCGAATATCTTGTTGAAAATGGGGATACACTACATTTAGTCGAAAGGCAACCGGCTCAGTCACAACTTTCTGGAGGTAGCTCTGGAGAAGCTAGCGGTTCTAATGGCAACCGAGGCAATGATGCAAACACAGGCCCTCCTCGAAACCGTATAGGGCAAATTTCCCACAGTGTTGTTCTTGGCACTTTTAATGTTGGCGATCAGGGTGAAGGCGTAGTTCCTGACCTTACTCGGGTCATTGGTGCAGTTCTGAATTCTATTGGCATTGGTGGCCAAGGTCCTACTAATCTTAGTGCTTCCACACAAACGTCATCCACAAATGTGACTGGACAGACAACTCAAGGAATTGCAGCTGACGGGTGGAACGTTGGTGGCCAGAGCCAACCAGCGAACCAGGCACAATCTGGACAGTTATTTTCTAGTCAAACATTTCAATCTTTGCCTCAGGCTTTCCAGATTCCTCTGGCTGCTGGAACCTTACCAATTCCTTCACTTAACATGCCAATACCGGATTCATTGACTACCATGTCTGAGTTTATGAACCGCATGGAGCAGACACTGTCACGAGATGGGTTCCATCCAAATTCATCTTCTGCCAACCATAGTGATTCCGATCGTGTGAATTTGCCTACCAATGCACAAGGGATTCCTACTCCTGAAGCTTTAAGCATAATTTTGCGTCAAGCAGAACGACTTCTAAGCAGTAATGCTGTTGCTGCACTATCTGATTTTGCTGGGGGATTGGAACGAGAAGGTGCATCTTCTGAACCCAGCATAAGGGCCCGCATTCAGGCTGAATCAATGCAAACTGGACTAGCTATGCAACATTTAGGTGCACTACTACTTGAGCTTGGCCGTACAATATTGACACTGCGTTTGGGGCAATCTCCTGCGGAATATGTTGTCAATGCCGGGCCTGCAGTTTATATTTCTCCTTCTGGCCCAAATCCTATAATGGTTCAGCCTTTTCCACTTCAGACAAGCTCCCTCTTTGGCAGTTCTGTTCCACCTAGTTCTGCAACATTTGGTCCTGTTGGCAGCGGAAGTGCTCCAAGGAACATAAACATCCATATACATGCTGGTCCTGCTCTTGCACCAATTGTTTCAGCTATTGGTCCCAGACCAAACAATGGAGAAGGTAATCAGGGTGAAAGCCGTAATGGTAGTGGTTCTGGAGATTCCGGTTCTATGCGAGTAACACCCCTCAGAAATATCATTGCTGCCACTATCCCATCACGCCCCACTGGAGTTGCAGCAACAAGTGCAGGTCAGTCTGAAGCTGATGTTTCGGAGCAGCAATCTGGTTCTGACTCACTATCCTCTGTCTTAGCTGATATAAATTCTCGGCTAAGAAACTGCATTGGGGAATCACAAGGGGATAGCGTTAATCGAGCAGGTGAAGCAGAAACAGGGGGTCAAGATTCATCCAGTGGGTCTGGATCAGAAAGTGTTATGGGGAGTGTACAACTTAATCCCACGGTTCAAAATGGTGTTCAGAATTCCAACTTGTCATTAGCTGGGGGCATGTCTGAGAATGGAAGTGAAAAGGAGATGACTGTTTCAAGCTCAAAAGACACTTCAACTATTTCCCTTGGAGGCACCAGAAGTTTCCCAAGCGGTGGAATTACCCCAATGCCTGGCATTGCTGAAGAAAAGGAGCCATCAAGTAGTGAATCTGCAGTACCTGGCAATATTCCTCTTGGGTTGGGCGCAGGTGGCTTGGAGCGTAAGCGGCGAGGCAAGCAGCAACCTCAAAATGTGAAGGGTGGTGTTGGTGGTGCAAGTTCTGATATGCAGAACCAACATGCTAGAGTGGGTGTTCAACACATGATGCAATCTTTGGCAAATCGTGGATCATCAATGAACCAAATTAGTGCCAGAGAAACCTCTGTGGGGCCTTCTCCCTCCTCTGTTGGTCCGGCAGATGTATCTGGTGTAATGTCACAGGTTTTGCGTAGCCCTTCTTTGAACGGTTTATTGTCGGGAGTATCAGAGCAAACTGGCGTTGGATCTCCTGATGTCCTGAGGAACATGTTGCAGCAGTTCACTCAGAATCCTCAAATGATGAATACTGTCAATCAGGTTTTTCAGCAGGTTGGCAGCCAGGATCTTGAAAATATGGTTGCTGGGATGGAAGGTACCCAAGGTGGTGGCATTGATTTGTCAAGGATGCTTCAACAGATGATGCCTATTGTATCTAGAGCCCTTAGTGGTACATCTACCCAGTCTCATGCTTCCTCTGCTGCAGAAACTGAGCCACTACCATCAAACAGTTTTCAGACACGTGGAAGGGATGTTATTTCTGACGTTCAAAATTTTCAGACCAATCTTCAACCGGTGGTTCAAAGGATTGAACGTCTGGATCCACCAGCGGATATTTTCCATGCTTTGGTTGAAAATGTTATTCAGCTTTCAGACAATGGAGATGGCTCTAATAATCGTTTGGATGAGCTCTGCAGTGATGAGCTCCTTGCTAGAGAATACTTTGAGAAGTTAAGTCGAGATTTAGGTAAGCGCTTCGATGGTGATCCAGAGGCGGACCAAAGTTAG 2787 0.4593 MADNCSNDGSSTSNLSAGGSDSTVQINIKTLNSHIYTFQVDKKMPISSFKEKIANEIGLPVNQQRLIFRGKVLKDEHLLSEYLVENGDTLHLVERQPAQSQLSGGSSGEASGSNGNRGNDANTGPPRNRIGQISHSVVLGTFNVGDQGEGVVPDLTRVIGAVLNSIGIGGQGPTNLSASTQTSSTNVTGQTTQGIAADGWNVGGQSQPANQAQSGQLFSSQTFQSLPQAFQIPLAAGTLPIPSLNMPIPDSLTTMSEFMNRMEQTLSRDGFHPNSSSANHSDSDRVNLPTNAQGIPTPEALSIILRQAERLLSSNAVAALSDFAGGLEREGASSEPSIRARIQAESMQTGLAMQHLGALLLELGRTILTLRLGQSPAEYVVNAGPAVYISPSGPNPIMVQPFPLQTSSLFGSSVPPSSATFGPVGSGSAPRNINIHIHAGPALAPIVSAIGPRPNNGEGNQGESRNGSGSGDSGSMRVTPLRNIIAATIPSRPTGVAATSAGQSEADVSEQQSGSDSLSSVLADINSRLRNCIGESQGDSVNRAGEAETGGQDSSSGSGSESVMGSVQLNPTVQNGVQNSNLSLAGGMSENGSEKEMTVSSSKDTSTISLGGTRSFPSGGITPMPGIAEEKEPSSSESAVPGNIPLGLGAGGLERKRRGKQQPQNVKGGVGGASSDMQNQHARVGVQHMMQSLANRGSSMNQISARETSVGPSPSSVGPADVSGVMSQVLRSPSLNGLLSGVSEQTGVGSPDVLRNMLQQFTQNPQMMNTVNQVFQQVGSQDLENMVAGMEGTQGGGIDLSRMLQQMMPIVSRALSGTSTQSHASSAAETEPLPSNSFQTRGRDVISDVQNFQTNLQPVVQRIERLDPPADIFHALVENVIQLSDNGDGSNNRLDELCSDELLAREYFEKLSRDLGKRFDGDPEADQS* 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02651 928 MobiDBLite consensus disorder prediction 454 477 - -
Pte1g02651 928 PRINTS Ubiquitin signature 55 75 IPR019956 -
Pte1g02651 928 PRINTS Ubiquitin signature 34 54 IPR019956 -
Pte1g02651 928 PRINTS Ubiquitin signature 76 97 IPR019956 -
Pte1g02651 928 MobiDBLite consensus disorder prediction 535 676 - -
Pte1g02651 928 MobiDBLite consensus disorder prediction 815 840 - -
Pte1g02651 928 Gene3D - 13 108 - -
Pte1g02651 928 Pfam Ubiquitin family 26 96 IPR000626 GO:0005515
Pte1g02651 928 MobiDBLite consensus disorder prediction 447 519 - -
Pte1g02651 928 MobiDBLite consensus disorder prediction 1 21 - -
Pte1g02651 928 CDD Ubl_ubiquitin_like 26 93 - -
Pte1g02651 928 PANTHER LARGE PROLINE-RICH PROTEIN BAG6 11 926 - -
Pte1g02651 928 FunFam Large proline-rich protein BAG6 16 109 - -
Pte1g02651 928 ProSiteProfiles Ubiquitin domain profile. 24 99 IPR000626 GO:0005515
Pte1g02651 928 SUPERFAMILY Ubiquitin-like 20 97 IPR029071 -
Pte1g02651 928 MobiDBLite consensus disorder prediction 97 131 - -
Pte1g02651 928 MobiDBLite consensus disorder prediction 267 293 - -
Pte1g02651 928 MobiDBLite consensus disorder prediction 547 616 - -
Pte1g02651 928 MobiDBLite consensus disorder prediction 493 519 - -
Pte1g02651 928 SMART ubq_7 24 95 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02651 Pte-Chr1 46713437 46720213 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02651 24 95 Cytoplasmic Ribosomal Protein Gene Family AT3G52590 43.056 1.50e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02651 - - cave:132189192 949.503