Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02631 ATGGCGATGGATAGGCAGAGAGATGTAGGTGAAGAAGGAGGAGCGTTTTTAGATGAAGGGAATGCCAATCTGCCGGAGGAAGTCGACGTGGTGCAAGGGATATTTAATGTAATCGAGAGGGTTGCGCGGTTTGGGGATTACAGAAGGACACAGAGGAAGGAATGCTGTAACCTCGTCAGGCGTATGAAGCTACTTTTGCCACTCCTTGAAGAAATTCGAGAGACTGATGAACCGATTTCGGATAATGCCCATAACTGGTTATGTGTTTTGAAGAAAGCTCTCGTTCTGGCCAAGAAGCTTTTGCAGTTATGTAGCGAAGGCAGCAAGATTTATCTGGCACTTGAGAGCGAGGCAATCATGATTAAATTCCATAACGTTTATGAAAACTTAAGCCAAGCCTTTGATTCGTTGCCTACCGGAGAACTTGAGTTGTCAGACGAAGTCAAGGAACAGCTTGAGCTCATGGCTGTGCAACTTGGACGGGCTAAGAGGCGGACTGATACACAAGACATAGAACTTGCCGTGGATGTGATGGTCTTGTTATCAAAGAAGGATGATCAAAAAGCTGAAAGAGCTATAGTGGAGAGACTCGCAAAAAAACTTTCTCTTCAAACAGTTGAGGATCTTAAGATAGAAACAATAGCAGTGCGGAGCCTTTCTAAGGAAAGAGGAGGACCCAGTGCTGAGACCATGCAACAAATCCTTGAACTTCTGAACAAATTTAAGAGAGTTGCAGGGATGGAAGAAACTAAAACTCTTGATGACCCTGTAGTGAATAAAATACTTATAAGATCTTTATCATTGGTGATCCCTCATGAGTTTCTATGTCCCATCACGCTGGAAATCATGACAGATCCTGTTATCATTGCGAGTGGTCAGACATACGAGAGGTATAGCATACAGAAGTGGTTTGACACCAATCACAGGACTTGCCCAAAGACCAGAAAGATTCTTACGCACCTGTCAATTGCACCAAACTATGCCTTAAAAAATATCATCGTGCAGTGGTGTGAGACCAACAATTTTCATCTCCTGAAGAAAATTCCTTCTTCTTCAGTTCAGGGAAGCCCTGGCAATGAGCAGAAAGAGGACATATCGTCTTTGATTCAGGAGCTTTCTTCTATTCATTTAGACGTACAAAGAAAGGGAGTGGCACAGATACGCCTTCTATCAAAGGAAAATTCTGAGAGTAGGATCATGATTGCTAGGAGTGGAGGAATACCACCACTGATACAACTTTTGTCATATCCGGATCCCAAAATTCAGGAGCATGCAGTGACAGCTTTATTAAATTTATCAATTGATGAATCTAACAAGAAACTCATTTCTTCAGACGGAGCCATACCAGCTATAATAGAAGTTTTAGAGCAGGGTAGCATGGAGGCCAGAGAGAATTCTGCAGCAGCTTTATTTAGCTTGTCGATGCTTGATGAGAATAAAGTACTTATAGCGCAATCAAATGGCATCCCTCCGTTGATTGATTTATTAAAAGAGGGGACAATCAGGGGGAAAAAAGACGCTCTTACAGCACTTTTTAACTTAACACTGAACCATGCAAATAAGGCCAAAGCCGTCAGTGCTGGTATTGTGACACCTTTACTTAAATTGCTTAAGGACCAAAATTTGTGTATGATCGATGAAGCCCTCTCAGTCTTCCTACTCCTTGCATTACATCCAGATGGAAGGCAAGCAATTGGACAGCTCTCATTTATTGAAACTCTAGTTGAATTCATCCGAGAAGGAACCCCCAAGAATAAGGAATGTGCAGCATCGGTTCTCCTGGAGTTGGGTTCAAATAATTCCTCTTTCGTTCTGGCAGCACTTCAATTTGGAGTGTATGAGCATTTGGTTAAGCTTAAAGAAAATGGAACAAACCGTGGACAGAGAAAAGCAAACGCGCTGTTAAAGCTCATAAGCAGAAGCGAACATCTTTGA 1935 0.4238 MAMDRQRDVGEEGGAFLDEGNANLPEEVDVVQGIFNVIERVARFGDYRRTQRKECCNLVRRMKLLLPLLEEIRETDEPISDNAHNWLCVLKKALVLAKKLLQLCSEGSKIYLALESEAIMIKFHNVYENLSQAFDSLPTGELELSDEVKEQLELMAVQLGRAKRRTDTQDIELAVDVMVLLSKKDDQKAERAIVERLAKKLSLQTVEDLKIETIAVRSLSKERGGPSAETMQQILELLNKFKRVAGMEETKTLDDPVVNKILIRSLSLVIPHEFLCPITLEIMTDPVIIASGQTYERYSIQKWFDTNHRTCPKTRKILTHLSIAPNYALKNIIVQWCETNNFHLLKKIPSSSVQGSPGNEQKEDISSLIQELSSIHLDVQRKGVAQIRLLSKENSESRIMIARSGGIPPLIQLLSYPDPKIQEHAVTALLNLSIDESNKKLISSDGAIPAIIEVLEQGSMEARENSAAALFSLSMLDENKVLIAQSNGIPPLIDLLKEGTIRGKKDALTALFNLTLNHANKAKAVSAGIVTPLLKLLKDQNLCMIDEALSVFLLLALHPDGRQAIGQLSFIETLVEFIREGTPKNKECAASVLLELGSNNSSFVLAALQFGVYEHLVKLKENGTNRGQRKANALLKLISRSEHL* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02631 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 487 529 IPR000225 GO:0005515
Pte1g02631 644 MobiDBLite consensus disorder prediction 1 20 - -
Pte1g02631 644 SUPERFAMILY RING/U-box 269 345 - -
Pte1g02631 644 Gene3D - 357 481 IPR011989 -
Pte1g02631 644 Gene3D - 482 643 IPR011989 -
Pte1g02631 644 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 270 344 IPR013083 -
Pte1g02631 644 CDD RING-Ubox_PUB 271 321 IPR045210 -
Pte1g02631 644 SMART Ubox_2 273 336 IPR003613 GO:0004842|GO:0016567
Pte1g02631 644 FunFam RING-type E3 ubiquitin transferase 349 644 - -
Pte1g02631 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 446 488 IPR000225 GO:0005515
Pte1g02631 644 Pfam Armadillo/beta-catenin-like repeat 477 515 IPR000225 GO:0005515
Pte1g02631 644 Pfam Armadillo/beta-catenin-like repeat 394 433 IPR000225 GO:0005515
Pte1g02631 644 ProSiteProfiles U-box domain profile. 269 343 IPR003613 GO:0004842|GO:0016567
Pte1g02631 644 CDD MLKL_NTD 28 159 - -
Pte1g02631 644 FunFam RING-type E3 ubiquitin transferase 265 343 - -
Pte1g02631 644 SUPERFAMILY ARM repeat 361 639 IPR016024 -
Pte1g02631 644 Gene3D - 25 140 IPR036537 GO:0007166
Pte1g02631 644 SMART arm_5 476 516 IPR000225 GO:0005515
Pte1g02631 644 SMART arm_5 435 475 IPR000225 GO:0005515
Pte1g02631 644 SMART arm_5 558 598 IPR000225 GO:0005515
Pte1g02631 644 SMART arm_5 394 434 IPR000225 GO:0005515
Pte1g02631 644 SMART arm_5 517 557 IPR000225 GO:0005515
Pte1g02631 644 PANTHER U BOX DOMAIN-CONTAINING 52 638 - -
Pte1g02631 644 FunFam RING-type E3 ubiquitin transferase 27 140 - -
Pte1g02631 644 Pfam U-box domain 270 340 IPR003613 GO:0004842|GO:0016567
Pte1g02631 644 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 405 447 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02631 Pte-Chr1 46590787 46593871 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02631 30 645 U-box Gene Family AT5G42340 64.123 0.0 774
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02631 - - jre:109016026 864.374