Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02626 ATGAGTTGCTTTTATTGCTTTAGCTCCCGTAGGAAGGAGTTCACTAGGGTCGAAATTGACAATGGTTCACGAAGGAGTCCTTCCGTAGCTAGTGTCAGAGGAAAGTCGCTTCCTGCATCTGCTGAAAGTGGAGGGGGAAGAGTATCTGCCAAACGTGCGTCTAGCCCATCAAATAGTGCTGCCCGCAGTTTCACGTTTCGTGAACTAGCAACGGCCACCAGGGGCTTTAAGGAAGTGAATTTGATAGGAGAAGGGGGGTTTGGAAGAGTTTACAAGGGTCGCTTAGAAAACGGCCAGGTTATAGCTGTTAAACAATTGAGTCCTGAAGGCCATCAAGGTTTCCAGGAATTCATTGTCGAGGTTCTTATGCTAAGCCTTCTTCACCATCCAAATCTGGTTATCTTGATTGGCTACTGCACTGATGGAGATCAAAGACTTTTGGTTTACGAATACATGCCAATGGGGAGCTTGGAAGATCATCTCTTTGAATTGGATGCTGGTAAAGAGACACTGAGTTGGGAAACCCGGATAAAGATTGCTGTCGGTGCGGCACGAGGACTGGAATACCTCCACTGCAAGGCAAACCCTCCTGTTATATACCGTGACCTGAAATCTGCCAACATCTTGCTCGACAACGACTTCAACCCAAAGCTCTCAGATTTTGGTCTTGCTAAACTTGGACCTGTTGGGGATAATACTCATGTTTCAACTAGAGTGATGGGGACTTATGGCTACTGTGCACCAGAGTATGCCATGAGTGGCAAGTTGACACTCAAATCTGACATATACAGCTTTGGTGTGGTCATGTTGGAACTGATAACAGGACGAAGGGCAATAGATCTCAGCAGGAAACCAGGAGAGCAGAATTTAGTTGCTTGGTCTCGCCCATTCTTGAGGGATCGAAAGAAATTTGTCCAAATAGTTGATCCTAATCTCCAAGGACGCTTCCCTCTCCGTTGTCTGCATCATGCAATTGCTATCACTGCAATGTGTATTCAAGAACAACCTCATTTCCGTCCTCTTATAGGTGACATTGTTGTTGCTCTGGAATACTTGTCCACTCTGAGTTTAACCCCAGAATCACATGAAGGGACTCGTAGTGTCCCTCAACAATCGCAGTCACAGCTGGACAGCAATGCCAAATCGCCAACTAAGATGAGTCCATGGTCAGTTTAG 1176 0.4617 MSCFYCFSSRRKEFTRVEIDNGSRRSPSVASVRGKSLPASAESGGGRVSAKRASSPSNSAARSFTFRELATATRGFKEVNLIGEGGFGRVYKGRLENGQVIAVKQLSPEGHQGFQEFIVEVLMLSLLHHPNLVILIGYCTDGDQRLLVYEYMPMGSLEDHLFELDAGKETLSWETRIKIAVGAARGLEYLHCKANPPVIYRDLKSANILLDNDFNPKLSDFGLAKLGPVGDNTHVSTRVMGTYGYCAPEYAMSGKLTLKSDIYSFGVVMLELITGRRAIDLSRKPGEQNLVAWSRPFLRDRKKFVQIVDPNLQGRFPLRCLHHAIAITAMCIQEQPHFRPLIGDIVVALEYLSTLSLTPESHEGTRSVPQQSQSQLDSNAKSPTKMSPWSV* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02626 391 Pfam Protein kinase domain 76 342 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02626 391 SUPERFAMILY Protein kinase-like (PK-like) 55 351 IPR011009 -
Pte1g02626 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Pte1g02626 391 MobiDBLite consensus disorder prediction 24 56 - -
Pte1g02626 391 FunFam probable serine/threonine-protein kinase RLCKVII 48 151 - -
Pte1g02626 391 CDD STKc_IRAK 82 350 - -
Pte1g02626 391 Gene3D Transferase(Phosphotransferase) domain 1 152 368 - -
Pte1g02626 391 SMART serkin_6 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02626 391 ProSitePatterns Protein kinases ATP-binding region signature. 82 104 IPR017441 GO:0005524
Pte1g02626 391 ProSiteProfiles Protein kinase domain profile. 76 352 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02626 391 FunFam Serine/threonine-protein kinase PBS1 152 367 - -
Pte1g02626 391 Gene3D Phosphorylase Kinase; domain 1 47 151 - -
Pte1g02626 391 PANTHER OS07G0668900 PROTEIN 51 358 - -
Pte1g02626 391 MobiDBLite consensus disorder prediction 360 391 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02626 Pte-Chr1 46541767 46545676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02626 1 370 Glycoside Hydrolase AT3G07070 57.754 1.08e-151 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Pte1g02626 Pkinase 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02626 - - zju:107419850 592.808