Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02613 ATGGCTTCCTATTTTTCAAATTCAAGCTGCGAAGGAGATATGTTCATGACTTCGTTTCCAAGGGATCAGAAACTTGCTTCTCATTCCGAAGCTTCATCCCATGCTGCCAATATTTTGATGTATCTCAATCAAAATTCTTCTGCATCCTACTCCGATGCTGCAACTTCCCTGTTACGTCATAGTCATAACTATTCTCAATCTGACAATGGCACCTGTGGTCCAGTTGGAAATTCAGTTATCGAAGACTCCAGTTTATTATCAAGGGGACTAATATATAATGAACAGAATGTGCAGTGCCATGGGTTGTCTCTTACTCTTGGTTCACCTATGCCTTCTGAAATATCCGAGCCTTCTTTTCAGTGCCAGTCTTCATATCCTGCAATGGCCTCCATGTTGACTACTGCTAAGGATTTCAAAAGTGATGAATGGATGTTTTTTACTTTCTCTTGTACCAGCCAAAATGCGATCAACCCAGAGGCTTCCTGGCATCCTAATTTTTTGGTAAGCCCTTCAGAAAAGCTCTCAAAAAGGAGGTGTGCAAACAGTATCTTAAATTCAAAATACCTCAGACCAGCACAGCGGCTGCTTGATGAGGTAATCAATGTCCAAAATTCATTAAAGCAGTCAGGTTCAGGAAAAAATAAAAACCTCCATGAGATGGCTTTTGGATCCAAGGATCTTGATGGAAGGATGCATGGTCGGTCATTGCAGACATTCTCAGACTCTAGTGTACTAAATAGAAACTCCTCCTCATGTGAACTATCACCTGCAGAAAGACAAGATTTGCTGGATAAGAAGACAAAGCTTATGTCCATGCTGGACGAGGTTGGTAAGAAATACAGGGAATACTGCCACCAAATACAAATAGTGGTGTCGTCATTTGACATGGTTGCTGGGTGTGGAGCTGCTGAGCCATATACTTCCCTTGCATTTCGAACTATTTCCCAGCACTTCCGATGTTTGCGTGATGCCATTGGTGGAGAGATTCAAATAATTCAGAGTAACCTTGGGGAGCAAGAGGGAATACCTCGTCTTCGTTACGTTGACCAACACCTTAGGCAACCGAGAGCTCTCCAGCAACTTGGTGTGACGAGACAAGCCTGGAGGCCTCAGAGAGGACTTCCTGAAAGCTGTGTTTCAATCTTACGGGCTTGGCTATTTGAACATTTCCTTCATCCTTACCCTAAGGACTCTGAGAAAATTATGCTGGCATGCCAGACAGGCCTGTCCAGAAACCAGGTAGCTAACTGGTTCATTAATGCAAGGGTGCGTCTTTGGAAACCTATGATTGAGGACATTTACAAAGAAGAATTTGACAAGTCTGATATGTCCTGCAACATTTCGCAGCAAGAAAGTTCACCAGCTAAGGATTCAAGAGATGATGGTCAAGCATCTAAGGATGGAGACAAGGAGTATCACGACAAATTAATTGGTGCTGTGATTTCAAAATCACAAGACGATCAAATGTCTAACGCAGACAAAAACAACTTGTGTTCAGTTGAGAACATGCCATCCGACCAGATTGGTGATATCAATCTTCTGACAGCTATTGGTGCCACATATGATTTATCAGAACTGGGTAGTTTAGCAATGAACGATCATGTTTCACTTGCATTAGAGCTGCGGAACTGTGAAAGTGGCGGCTTTTGTGTGTCTAGCGGGATCAATAGAAGAGTTGATGACAATACATCTCTCCCTGCAGAGACTGATTTTTTGGATTATCATTTCATGGACCCAGGAAAGGAACATCACAAGTTTGCAAATCCACATCTGTTACACGAATTTGTAGTTTGA 1794 0.4247 MASYFSNSSCEGDMFMTSFPRDQKLASHSEASSHAANILMYLNQNSSASYSDAATSLLRHSHNYSQSDNGTCGPVGNSVIEDSSLLSRGLIYNEQNVQCHGLSLTLGSPMPSEISEPSFQCQSSYPAMASMLTTAKDFKSDEWMFFTFSCTSQNAINPEASWHPNFLVSPSEKLSKRRCANSILNSKYLRPAQRLLDEVINVQNSLKQSGSGKNKNLHEMAFGSKDLDGRMHGRSLQTFSDSSVLNRNSSSCELSPAERQDLLDKKTKLMSMLDEVGKKYREYCHQIQIVVSSFDMVAGCGAAEPYTSLAFRTISQHFRCLRDAIGGEIQIIQSNLGEQEGIPRLRYVDQHLRQPRALQQLGVTRQAWRPQRGLPESCVSILRAWLFEHFLHPYPKDSEKIMLACQTGLSRNQVANWFINARVRLWKPMIEDIYKEEFDKSDMSCNISQQESSPAKDSRDDGQASKDGDKEYHDKLIGAVISKSQDDQMSNADKNNLCSVENMPSDQIGDINLLTAIGATYDLSELGSLAMNDHVSLALELRNCESGGFCVSSGINRRVDDNTSLPAETDFLDYHFMDPGKEHHKFANPHLLHEFVV* 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02613 597 CDD homeodomain 368 429 IPR001356 GO:0003677
Pte1g02613 597 SMART prehox3 177 327 IPR006563 -
Pte1g02613 597 SMART HOX_1 368 432 IPR001356 GO:0003677
Pte1g02613 597 Pfam Associated with HOX 183 325 IPR006563 -
Pte1g02613 597 ProSiteProfiles 'Homeobox' domain profile. 365 428 IPR001356 GO:0003677
Pte1g02613 597 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 66 458 - -
Pte1g02613 597 Gene3D - 364 442 - -
Pte1g02613 597 MobiDBLite consensus disorder prediction 454 469 - -
Pte1g02613 597 MobiDBLite consensus disorder prediction 444 469 - -
Pte1g02613 597 Pfam Homeobox KN domain 385 424 IPR008422 GO:0003677|GO:0006355
Pte1g02613 597 SUPERFAMILY Homeodomain-like 369 433 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02613 Pte-Chr1 46463581 46467044 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02613 182 451 Homeobox Transcription Factor Family AT1G19700 59.220 1.43e-105 327
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte1g02613 POX 1.8e-45 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02613 - - gmx:100791641 528.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02613 1 46463581 46467044 Pte1g02613 1 46463581 46467044 RCT