Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02597 ATGGCAGCAAACCCCAACTCATGTTGGACGCCAAAGCAAAACAAACAGTTTGAGAAGGCTCTGGCTGTTTATGACAAGGATACCCCAGACCGCTGGCACAATGTGGCCAAGGCTGTGGGTGGAAAGTCTGCTGAGGAAGTAAGGAGGCACTATGAGATCCTCTTGGAGGATCTCATGCATATAGAGAACGGTCAAATCCCCATTCCCGCTTACAGAGCTGCCAAGAGTAATATTGGCATGAGAGAGGTGGGCGATGAGCACAGGCTGATGATGATGAAGAATTTAAAGCTTCAGTGA 297 0.4882 MAANPNSCWTPKQNKQFEKALAVYDKDTPDRWHNVAKAVGGKSAEEVRRHYEILLEDLMHIENGQIPIPAYRAAKSNIGMREVGDEHRLMMMKNLKLQ* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02597 98 Gene3D - 3 68 - -
Pte1g02597 98 ProSiteProfiles Myb-like domain profile. 9 55 IPR001005 -
Pte1g02597 98 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 5 76 IPR044636 GO:0003700
Pte1g02597 98 FunFam Transcription factor SRM1 1 68 - -
Pte1g02597 98 SMART sant 5 57 IPR001005 -
Pte1g02597 98 Pfam Myb-like DNA-binding domain 8 51 IPR001005 -
Pte1g02597 98 CDD SANT 9 55 IPR001005 -
Pte1g02597 98 SUPERFAMILY Homeodomain-like 7 63 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02597 Pte-Chr1 46372511 46374512 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g02597 Myb_DNA-binding 1.4e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02597 - - qsa:O6P43_016180 148.288