Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02587 ATGACCTCGGGTTCGAGTTGGACTGCAGAGCAAAATAAGATGTTCGAGAATGCTCTAGCCATTCATGACAAGGACACCCCAGATCGATGGCAGAAACTGGCAAATGCAATTCGTGGCAAGACGGCTGAAGATGTTAAGAAGCACTATGACATTCTCGTGGAAGATATCAAGCGAATTGAGAACGGCCAGGTGCCTCTCCCCAATTACAGATCAAGGACGACAGTAAGGGCTACCAAAGGTTATGGTTACATGAATGACTGA 261 0.4674 MTSGSSWTAEQNKMFENALAIHDKDTPDRWQKLANAIRGKTAEDVKKHYDILVEDIKRIENGQVPLPNYRSRTTVRATKGYGYMND* 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02587 86 FunFam Transcription factor SRM1 1 66 - -
Pte1g02587 86 Gene3D - 1 66 - -
Pte1g02587 86 SMART sant 3 55 IPR001005 -
Pte1g02587 86 ProSiteProfiles Myb-like domain profile. 1 53 IPR001005 -
Pte1g02587 86 SUPERFAMILY Homeodomain-like 5 61 IPR009057 -
Pte1g02587 86 CDD SANT 6 49 IPR001005 -
Pte1g02587 86 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 5 74 IPR044636 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02587 Pte-Chr1 46238948 46239953 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pte1g02587 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02587 - - qsa:O6P43_016174 120.168