Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02577 ATGGAGGAGCTTGAGGACCCGTCCGCTTTGACTGTTTGTACGGTTTCAGGAGAGCCTAGCTTATCATCTTCCGATAGACAGATGCCACAGCAAAAGAAGAAGCGAAACCTGCCTGGAATGCCAGATCCAGATGCCGAGGTAATTGCTTTGTCGCCAAAAACTCTTATGGCCACAAACCGTTTTGTGTGCGAGATCTGCAACAAAGGCTTTCAGCGCGACCAGAACTTACAGCTTCACAGGAGAGGTCACAACCTTCCATGGAAGCTCAAGCAGAGAACCAACAAGGAAGTTCGAAAACGAGTGTACGTGTGTCCTGAAATTTCATGCGTACACCACAACCCATCGAGAGCGTTGGGTGATCTCACTGGCATTAAGAAACACTTTTGCAGAAAACATGGTGAAAAGATGTGGAAGTGTGAGCGGTGCTCAAAGAAGTACGCCGTACAATCTGATTTGAAGGCTCACATGAAGGCTTGTGGAACAAAAGAATATAAATGCGATTGTGGCACCTTGTTTTCGAGGAGGGATAGCTTTATAACACACAGGGCATTCTGTGACGCATTGGCAGAGGAGAGCGCTAAGTCTCAGAAGCCAAACAATAGTGAAGGTACTTCGATTGTGAAAGCAGCTGCGGCTTCACCACCACCGCCTCCCCTTACTCCAAGCACCACTGTGGTGTCCCCATCTGCGTCCATCCAGAGCTCAGTGGACATGCCGCAGAATGCAGCTCGAGTTTTGCAGCCAAGTTCAGTGACAACCAGTTTGACTGCTTCAACGGCCAAGACCAGTTCTGCCAGTGTGTTTGCCACCGTGAGATTCTGTTTATATGGCTATAATCAGCTAAACCTTCCTGCCAGGGTAACAAAAGGCATGGACTTCCCAACATTTGGTTCTCCTGTTCGTACCCTTCAGTCCAAGAAGAATAATTACAGTATAGACGGAGGTCATCATTCTCCGACCAGATTTCAGGATTCAAAGCAAGTTTACCGCCAAAGCCCTTTATCCCAAGAGGTAGCAACTTCACATGACAATGAGGCGTCCTCTATGACACCTGAAGAAATAGACGAAGGGACCAAGTTAAAACAAGAGTTGAGTGACAGCAATTTTCAGTTCCATTTCTCCATATATAAATGGGCAAGTAAAGGAGTGCCTTTTGCAATGCCCCTTAAGCAGGGTAATGAGAAAGGTAGACATGTGACATCCTTGATCTCCAAAGAGCAGTTGCCTACTGTGACTCCTCAAAACTGTAGTGATAGTCCTTTTGCTTGTGGCAAATCCTCTACGACCTCAAGGGCAAAAGACGATTATAAACCATCATCACAAGTATATGAGATACTTCCACGTGAAAGTGAAACCGTAGAAGAAGAAACCCTTTCGAAAGTTCAATCAGCAACTTCAAACATCCTGCTGGAGAGTACTAAACAAATTCAAGTTAACAATGCTGTGTCTGGTCGGTCGAGAAATGAATCGAGTTCAGCTTCTGCGAATGCACGTGGAAGTACCGTGAAGTCCCAATTGAGGCCACTGCGTTCTTTGCTCAGTGAAAGTGACGACGAAGGGGCACTGCGACCTGCAGGCGATGGTGAGATAAGAAAAGGAGACTGTGCAAGACAAAACAAAACACAAAACACCAAGTCAACTTTTGTGTTTAATGGCGTAAACGAAAAGAAAGTAGAGAGGAAAATAACTGTGCCTGATGCTGTGAACGTCGATAAGTTTATTCCCCAAGTTGTAGAGAATACCTCCATTAAGAATCCATGGAAGAATGCCGTGAAAGGGAAGGTCAATGAATTCGTTCGTATGTTCAACCAAGAATCGTCACCAAAACCAAAAGATTTCGTGATCTCTCACAGCCAGGATGTAACACCAAACACTTCTGGGGAAGTGAATCGAATACAGGAATATCTAAGACAGTTTGACCAAGAGAAAGTTGCCAAAGCAACTGAGGATCCGGATATATCTCTTAATCCTTCGCATGAATATACTGCTGTTGATATCACAGGACCGACGATCCCTGATACAGACCAATACCTGCAAATTAATTTCATGATTAAGGAATTAGCTCAAGAAGAGATCAATCTGCTGGAAACTCAAGATAATCACGAGGAAGCAAAGGTTATCGATGCTAAGATTCGGCAATGGTCAACTGGAAAGGAAGGAAACATACGGTCGCTGCTGTCAACTTTACAACATGTGCTTTGGCCAGGAAGCGGATGGAAGACGGTGCCTCTGGTTGACATAATTGAAGGAAGCGCGGTGAAAAGGGCATATCAAAGAGCCTTACTCTGTCTGCATCCAGATAAGCTGCAGCAGAAGGGTGCAGCTACTCATCAAAAATACACTGCCGAAAGAGTTTTCGACATTTTACAGGAGGCATGGAATCAGTTCAACTTGCTCGGAGCAGTGTAA 2409 0.4521 MEELEDPSALTVCTVSGEPSLSSSDRQMPQQKKKRNLPGMPDPDAEVIALSPKTLMATNRFVCEICNKGFQRDQNLQLHRRGHNLPWKLKQRTNKEVRKRVYVCPEISCVHHNPSRALGDLTGIKKHFCRKHGEKMWKCERCSKKYAVQSDLKAHMKACGTKEYKCDCGTLFSRRDSFITHRAFCDALAEESAKSQKPNNSEGTSIVKAAAASPPPPPLTPSTTVVSPSASIQSSVDMPQNAARVLQPSSVTTSLTASTAKTSSASVFATVRFCLYGYNQLNLPARVTKGMDFPTFGSPVRTLQSKKNNYSIDGGHHSPTRFQDSKQVYRQSPLSQEVATSHDNEASSMTPEEIDEGTKLKQELSDSNFQFHFSIYKWASKGVPFAMPLKQGNEKGRHVTSLISKEQLPTVTPQNCSDSPFACGKSSTTSRAKDDYKPSSQVYEILPRESETVEEETLSKVQSATSNILLESTKQIQVNNAVSGRSRNESSSASANARGSTVKSQLRPLRSLLSESDDEGALRPAGDGEIRKGDCARQNKTQNTKSTFVFNGVNEKKVERKITVPDAVNVDKFIPQVVENTSIKNPWKNAVKGKVNEFVRMFNQESSPKPKDFVISHSQDVTPNTSGEVNRIQEYLRQFDQEKVAKATEDPDISLNPSHEYTAVDITGPTIPDTDQYLQINFMIKELAQEEINLLETQDNHEEAKVIDAKIRQWSTGKEGNIRSLLSTLQHVLWPGSGWKTVPLVDIIEGSAVKRAYQRALLCLHPDKLQQKGAATHQKYTAERVFDILQEAWNQFNLLGAV* 803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02577 802 MobiDBLite consensus disorder prediction 480 539 - -
Pte1g02577 802 SUPERFAMILY Chaperone J-domain 696 796 IPR036869 -
Pte1g02577 802 Gene3D Classic Zinc Finger 114 196 - -
Pte1g02577 802 Gene3D Classic Zinc Finger 41 108 - -
Pte1g02577 802 Coils Coil 799 802 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 208 227 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 1 43 - -
Pte1g02577 802 PANTHER SERINE/THREONINE-PROTEIN KINASE RIO 23 527 IPR031140 -
Pte1g02577 802 MobiDBLite consensus disorder prediction 410 436 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 307 356 - -
Pte1g02577 802 SUPERFAMILY beta-beta-alpha zinc fingers 60 157 IPR036236 -
Pte1g02577 802 ProSitePatterns Zinc finger C2H2 type domain signature. 63 83 IPR013087 -
Pte1g02577 802 Pfam Zinc-finger of C2H2 type 61 83 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 13 27 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 512 538 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 480 511 - -
Pte1g02577 802 ProSiteProfiles Zinc finger C2H2 type domain profile. 137 165 IPR013087 -
Pte1g02577 802 FunFam protein indeterminate-domain 12-like 40 108 - -
Pte1g02577 802 Coils Coil 685 705 - -
Pte1g02577 802 FunFam protein indeterminate-domain 5, chloroplastic-like 115 194 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 307 347 - -
Pte1g02577 802 MobiDBLite consensus disorder prediction 410 439 - -
Pte1g02577 802 FunFam J-domain protein required for chloroplast accumulation response 1 698 801 - -
Pte1g02577 802 Gene3D DnaJ domain 676 800 IPR036869 -
Pte1g02577 802 SMART c2h2final6 61 83 IPR013087 -
Pte1g02577 802 SMART c2h2final6 102 132 IPR013087 -
Pte1g02577 802 SMART c2h2final6 137 157 IPR013087 -
Pte1g02577 802 ProSiteProfiles Zinc finger C2H2 type domain profile. 61 83 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02577 Pte-Chr1 46122409 46157341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02577 14 196 IDZ Gene Family AT3G50700 82.540 6.03e-112 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pte1g02577 zf-met 0.0062 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02577 K25869 - qsa:O6P43_018833 381.333