Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02561 ATGCAACTATCCTCTTCCACCTATGCAATCTCCACACCAACCACAGTCCCTTGCTCTGCTACCTCTACCATGCAACTTTCTCCACTCATTGCTTCTCTGATAAAAGCAGATGTCCCTATAGTTAAGGGACTCTCATGGACTTTCTATGAATCAAGCTGTCCTCAAGTTGAATCCATCGTCAGGAAACATCTCAAGAAAATTTTCAAGGAAGATATTGGCCAAGCTGCTGGCTTGCTCCGCCTTCACTTCCATGACTGCTTTGTTCAGGGCTGCGATGGCTCAGTTTTGCTTGATGGCTCAGCGAGTGGACCAAGTGAGCAGCAGGCACCTCCAAACCTAAGCTTGAGGGCTCAAGCGTTTAAGATCATCAACGACCTTCGTGCTCGTGTCCACAAGAGATGTGGCAGGGTGGTCTCTTGTGCCGATATCACAGCCATTGCTGCACGTGATGCCGTTGTTCTGGTACTCTATAATATAATCAATGATGAAGTGGCTGTATAG 501 0.475 MQLSSSTYAISTPTTVPCSATSTMQLSPLIASLIKADVPIVKGLSWTFYESSCPQVESIVRKHLKKIFKEDIGQAAGLLRLHFHDCFVQGCDGSVLLDGSASGPSEQQAPPNLSLRAQAFKIINDLRARVHKRCGRVVSCADITAIAARDAVVLVLYNIINDEVAV* 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02561 166 Pfam Peroxidase 60 154 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 SUPERFAMILY Heme-dependent peroxidases 38 155 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 ProSitePatterns Peroxidases active site signature. 75 86 IPR019794 GO:0004601
Pte1g02561 166 ProSiteProfiles Plant heme peroxidase family profile. 43 166 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Plant peroxidase signature 137 147 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Plant peroxidase signature 53 72 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Plant peroxidase signature 118 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Plant peroxidase signature 77 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PANTHER PEROXIDASE 25-RELATED 34 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Haem peroxidase superfamily signature 75 89 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 PRINTS Haem peroxidase superfamily signature 138 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pte1g02561 166 Gene3D - 44 162 - -
Pte1g02561 166 FunFam Peroxidase 47 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02561 Pte-Chr1 46024320 46025163 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02561 23 154 Peroxidase AT1G71695 64.662 1.03e-60 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02561 K00430 - csin:114309672 218.779