Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02555 ATGCCTCTGCATAAAAAACCTCATGCTTCTTCGTCATCGTCTTTACCCTCTACTTCTTCCTCACTACCTGCGACCAAGCAAAATGAAGGTGATACGGGTGGAAAGGGAGGTACGTTTACGGGCAACAAGGGGCACTCCTTCACGAGTCGACGGTTTATGCGACAGCGGAAGCTTCGGTACCTCACCGATTCTGACGTTGGGTTTACCAGCGGTATGGAGAAGGCGTCGTCCACGCCCGCTTCCTCACAAGTAGCTCCCAAGTCACGGTCACTCGGTCAGTCAGATCATTGGTCTTCGTCGGCCGTGCCGCAACCGCTACCGCTTCCAGTGACCCCGTTGACCAGGAAAGCAGAGTCATCAGGTTCCAGTTTCGGACTTAGTCAACTCACATCTCAACCTGTTACAGGCGCTAGGGTGAGGAAAGATGCCACCACATACCGTAGTGCATATAATTCTCAATTAGTTTATGTAAATCCTACCTACAGTCTCAAAGTAAGCATTCCACCTCAAAGTCTATCAGAAGGCGATTTTATCCGTCAGATAATGCCGTCAAAATCACAATTCATGGATTCTCTATCCGTAAAATTGGCCATTGATACAATGAAGAATGGAACTATTGATAATAGAAAATTCTCTCAAGATGTGGATGATCAATGTGGGGGAAGCAACGTCAAGCTGCAAGTTGCTACCAAGAGTGCCCCAACAAGTGTTTTATCCAGTCTCACAAGTAGCCCATGCAGAAATGCTAATTCCAATTCGCTTCCCCTTTCCTCAGATGTTCAGCAAGTTATGAATGCTGATCACTCTCCACTTCATAGTCCAACAAAGCGCTTCAGTCTAAAAGTTCAAGAGGGAAGTGCAACACCTGTGCACCAAAACTCACTTCCTGAGACGTCTGTAAAGTGGTCTGATATTAATGATCTTGTTGATGCACATCCACTGCCCCTTCCTCCCAACTCTACATCACCACTATTATCCTCTATGCAACCCCAATGTGCTGTAAATTATCATAATCTAGAAAGTTCTTTTGGTTCTCCAATGAAGGGTCAGTGGCAGAAAGGAAAACTCATTGGGCGTGGTACGTTTGGAAGTGTTTATCTAGCAACTAATCGAAAGACCGGAGCCTCATGTGCAATGAAGGAGGTCGATCTCATTCCTGATGATCCCAAATCTGCTGAATGTATTAAGCAATTGGAACAGGAAATTAAAGTTCTCCGTCGACTGAAGCATCAAAATATTGTGCAGTATTTGGGGAGTGAAATTGTAGATGATCACTTTCATATATATTTGGAGTATGTTCATCCGGGATCAATAAGTAAATTTATCCGTGAGCATTCTGGAGCTATGACAGAATCAGTAGTTCGTAACTTTACACGCCATGTTCTCTCTGGTTTAGCTTACTTGCATGCTCACAAGACTATCCACAGGGATATCAAAGGAGCTAATTTGCTTGTTGATGGATCAGGTACTGTCAAGCTTGCAGATTTTGGAATGGCCAAGATTCTAAATGGACGATCATATGATCTCTCTTTGAAAGGTAGTCCTTATTGGATGGCACCAGAGGTCATGAAAGCTGCAATACTGAAAGATGCCAGTCCTGATCTCGCTTATGCTGTTGATATATGGAGCTTAGGATGCACCATTATAGAAATGTTCAATGGAAAGCCTCCTTGGAGCGAATGTAAAGAAGGGCACCAAGCCATGTTCAAGGTTTTGCACAGTAGCCCACCTACTCCGGAAACACTATCTACAGAAGGACAAGATTTCCTCCAGCAGTGTTTTCAACGGGATCCTGCTCGGCGACCGTCAGCTGCTATTCTACTTGAGCATCCTTTTGTATGCAATTTGCAACATGAGAATAAATTTGTCAGCCTTCACCCGCAAACATCTCAACGAAATGAAATAGGAAGATCACCTAGTCCACGAGACTCTTCCAAGCAGAACAATGATTTGGCCTCAGCTTCTCGAGGCTCCCAAATTGTGAACAGTGATGAGAGTCGACCCTATAAAGCTGAAGAATCTAAGTTTGCGGCTCTCTACTGCAAAGCTCCTCGGCTTGAGCAACAAGTTCAATCCTCGCAACATGGTTCAAAATATTGTGCATCGTCTCCAAATGTTTCCAGTGATGTGGTGTTCGCTTTCAATTGCAAAACTTCCCCAACCTTCGAAGTATGTAATTAG 2181 0.4443 MPLHKKPHASSSSSLPSTSSSLPATKQNEGDTGGKGGTFTGNKGHSFTSRRFMRQRKLRYLTDSDVGFTSGMEKASSTPASSQVAPKSRSLGQSDHWSSSAVPQPLPLPVTPLTRKAESSGSSFGLSQLTSQPVTGARVRKDATTYRSAYNSQLVYVNPTYSLKVSIPPQSLSEGDFIRQIMPSKSQFMDSLSVKLAIDTMKNGTIDNRKFSQDVDDQCGGSNVKLQVATKSAPTSVLSSLTSSPCRNANSNSLPLSSDVQQVMNADHSPLHSPTKRFSLKVQEGSATPVHQNSLPETSVKWSDINDLVDAHPLPLPPNSTSPLLSSMQPQCAVNYHNLESSFGSPMKGQWQKGKLIGRGTFGSVYLATNRKTGASCAMKEVDLIPDDPKSAECIKQLEQEIKVLRRLKHQNIVQYLGSEIVDDHFHIYLEYVHPGSISKFIREHSGAMTESVVRNFTRHVLSGLAYLHAHKTIHRDIKGANLLVDGSGTVKLADFGMAKILNGRSYDLSLKGSPYWMAPEVMKAAILKDASPDLAYAVDIWSLGCTIIEMFNGKPPWSECKEGHQAMFKVLHSSPPTPETLSTEGQDFLQQCFQRDPARRPSAAILLEHPFVCNLQHENKFVSLHPQTSQRNEIGRSPSPRDSSKQNNDLASASRGSQIVNSDESRPYKAEESKFAALYCKAPRLEQQVQSSQHGSKYCASSPNVSSDVVFAFNCKTSPTFEVCN* 727
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02555 726 ProSiteProfiles Protein kinase domain profile. 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02555 726 FunFam Predicted protein 347 631 - -
Pte1g02555 726 Gene3D Transferase(Phosphotransferase) domain 1 348 653 - -
Pte1g02555 726 SMART serkin_6 351 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02555 726 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 28 626 - -
Pte1g02555 726 MobiDBLite consensus disorder prediction 67 128 - -
Pte1g02555 726 MobiDBLite consensus disorder prediction 69 101 - -
Pte1g02555 726 ProSitePatterns Protein kinases ATP-binding region signature. 357 380 IPR017441 GO:0005524
Pte1g02555 726 MobiDBLite consensus disorder prediction 626 665 - -
Pte1g02555 726 Pfam Protein kinase domain 352 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02555 726 MobiDBLite consensus disorder prediction 7 48 - -
Pte1g02555 726 MobiDBLite consensus disorder prediction 1 52 - -
Pte1g02555 726 Coils Coil 395 415 - -
Pte1g02555 726 SUPERFAMILY Protein kinase-like (PK-like) 340 633 IPR011009 -
Pte1g02555 726 MobiDBLite consensus disorder prediction 626 669 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02555 Pte-Chr1 45970083 45974931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02555 226 615 MAP Kinase Kinase Kinase AT5G66850 56.092 4.20e-153 459
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pte1g02555 Pkinase 1.5e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02555 - - qsa:O6P43_016100 598.201
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02555 1 45970083 45974931 Pte1g02555 1 45970083 45974931 RCT