Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02548 ATGAGTTATTCAGGCCAAAATGAAGTTTCTATTGATATTCTTCCATATCTCAGATTGTACAAGGATGGAACCATTGAGAGAATGGCTGGGAACCAAGTTGTTCATCCTGGCTTGGATTCTAAAACAAACGTTATCTCGAAAGACAAAGTTCTTTTCGCAAATATCGGCGTTTCAGCCAGGCTTTTCCGTCCCAATAGCTTCAGTGACAGCAAATGTGCTACGAAAGTACCCTTACTGGTCTACTTTCATGGTGGAGGGTTTTCCATATCTTCATCGGCTGACCCAGTTTACCAAACCTTTCTCAACAATCTTGTAGCCGACACCAACATTCTTGTTATGTCGGCAGACTATAGGAGAGCCCCAGAGCACCCACTTCCAACTGCATAG 387 0.4341 MSYSGQNEVSIDILPYLRLYKDGTIERMAGNQVVHPGLDSKTNVISKDKVLFANIGVSARLFRPNSFSDSKCATKVPLLVYFHGGGFSISSSADPVYQTFLNNLVADTNILVMSADYRRAPEHPLPTA* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02548 128 SUPERFAMILY alpha/beta-Hydrolases 12 128 IPR029058 -
Pte1g02548 128 Gene3D alpha/beta hydrolase 7 128 IPR029058 -
Pte1g02548 128 PANTHER ARYLACETAMIDE DEACETYLASE 13 128 - -
Pte1g02548 128 Pfam alpha/beta hydrolase fold 79 128 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02548 Pte-Chr1 45923558 45923944 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02548 7 125 Carbohydrate Esterase AT3G48690 43.697 3.02e-31 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02548 - - qsa:O6P43_016087 154.836