Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02539 ATGGAGACCTATATGAACTTTGGGACTGATCATCGGGTCGATAACGGCGGGTTCGGACGGCCTCCGGAGAATTTTCCGCTGACTCGGCAATCGTCTATCTATTCTCTCACATTCGACGAGCTTATGAACAGCGGTAGTATTGGAAAGGACGTTGAATCCATGAATATGGATGAGTTGCTAAAGAACATTTGGACAGTAGAAGAGTTCCAGACCGTGGTGGCCGCTGGTGCTCATCAGGAAGGAGCTGCTGCTGGTGTTGGCAGCAGTAGTGGTAAAGTTCTTGGCGGGAATTTGCAGAGGCAGGGTTCGTTGACGTTACCAGGGACACTTCGCCAGAAGACGGTCGAGGAGGTTTGGAAGGATATATCTAAGGAGTACAGTCTGGGAAAAAATAGGGGTGATTGTGGTGATGTCGGTTCAAGTTTCCCAACGAGGCAGCATACTTTCGCAGAGATTACATTGGAGGAGTTCTTACTAAGAGCTGGTGTTAGAGAAGATACTCAATTGGCTACAAAACAACACTCTGAAGTTTTTGGTGAGGAGTTCTCTTATCAGGGACAAGTGACCAGTAATGGTGGTTTAGGTTTCGAATTTCAGCAGTTAGATGATACGACCGGACTGACAGGGACGGTGGATTTTCCGAAGAGTAATGATCGAAGGAAAATTGAGTCATCAACTACTTTGCCATTGGATGTTGACGGCGTTAGATCAAATCTGCAACAGCAGCAGCTACGTCAGCCACAGTCACCGCCACCTCGCCAGCATCAGCTGCCGATCTTTCCTAAGCAGCCTTCTATGCCTTTTGCAAGCCGGATGGCTTCACCGACTGGTGTGGAACTGAGTGAGCCAGTGACTAGAAATGGGACTGTGGGAATTGTAAAGAGCAATGGTACTTCATCCGAGTCACCAGTTCCTTACATGTGTAATGGTGGTTTAAGAGGGAGGAGAGGCAATGGCGCTGTAGAAAAGGCGGTTGAGAGGAGACAGAAAAGAATGATTAAGAACAGAGAGTCCGCTGCTAGATCACGAGCTCGTAAACAGGCTTATACTGTGGAATTGGAAGCAGAAGTTGCGAAGCTGAAGGAGGAGAATCAAGAATTACAGAGGAAACAGGTACATTTAGACGTTTTGGCATGGTTAAGTTTAATTTTTTTACCGGAAATATTTTCATTCCAATCGTTTCTTTATTTACTGCAGGAAGAAATGATGGAAATGCAAAAGAATCAGGTACTCTGGAGTTTTTCTTCTAATTTCTTTCTTCCCATTTCAAAATTGGTCATACTTGTGAAATCTTGCACATCTTTCCACATTGCAATATTGTACAAATAG 1329 0.4515 METYMNFGTDHRVDNGGFGRPPENFPLTRQSSIYSLTFDELMNSGSIGKDVESMNMDELLKNIWTVEEFQTVVAAGAHQEGAAAGVGSSSGKVLGGNLQRQGSLTLPGTLRQKTVEEVWKDISKEYSLGKNRGDCGDVGSSFPTRQHTFAEITLEEFLLRAGVREDTQLATKQHSEVFGEEFSYQGQVTSNGGLGFEFQQLDDTTGLTGTVDFPKSNDRRKIESSTTLPLDVDGVRSNLQQQQLRQPQSPPPRQHQLPIFPKQPSMPFASRMASPTGVELSEPVTRNGTVGIVKSNGTSSESPVPYMCNGGLRGRRGNGAVEKAVERRQKRMIKNRESAARSRARKQAYTVELEAEVAKLKEENQELQRKQVHLDVLAWLSLIFLPEIFSFQSFLYLLQEEMMEMQKNQVLWSFSSNFFLPISKLVILVKSCTSFHIAILYK* 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02539 442 MobiDBLite consensus disorder prediction 208 272 - -
Pte1g02539 442 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 325 378 - -
Pte1g02539 442 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 325 374 IPR004827 GO:0003700|GO:0006355
Pte1g02539 442 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 330 345 IPR004827 GO:0003700|GO:0006355
Pte1g02539 442 Pfam bZIP transcription factor 327 370 IPR004827 GO:0003700|GO:0006355
Pte1g02539 442 SUPERFAMILY Leucine zipper domain 327 373 IPR046347 GO:0003700|GO:0006355
Pte1g02539 442 SMART brlzneu 323 378 IPR004827 GO:0003700|GO:0006355
Pte1g02539 442 MobiDBLite consensus disorder prediction 230 250 - -
Pte1g02539 442 Gene3D - 325 377 - -
Pte1g02539 442 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 27 402 IPR043452 GO:0003700|GO:0045893
Pte1g02539 442 MobiDBLite consensus disorder prediction 292 321 - -
Pte1g02539 442 CDD bZIP_plant_BZIP46 327 372 - -
Pte1g02539 442 Coils Coil 343 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02539 Pte-Chr1 45838877 45843221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02539 7 374 bZIP Transcription Factor Family AT1G49720 46.939 6.02e-71 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte1g02539 bZIP_1 4.9e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02539 K14432 - qsa:O6P43_018931 339.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02539 1 45838877 45843221 Pte1g02539 1 45838877 45843221 RCT