Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02537 ATGGACAGTATTAGCCATCTGAAGCCGGAGGATCATATGGAGTTGATGATGATGATGATGCAGATGGACAAGCTCCCCACAGATTTTTGTGGTTCCAACAGCGACATTAATCTCAACTTGTCATCTTTAGAGTTATCGGGTTCAAGTGGGTATTTTTCAAAATTTTCAGATAACTCAATTATGGCTTCGCCAAACTCATTCCCAAACTCACCGCCCACTAAACCGTTCTTTGATAATATCAGTTTAACCCAACCTCAAGACCAAACCCGCCTTCCACCCATTTTGTCTCCCAGTTCGAACACTAGAGGCAAGTGGAGAAAGACAGGAGACTTTTCAACAATAGATGCATTCGCCATATCGATGGAGAAGCAGAATTCGATGGCTTCCATGAGAGAGATGATATTCAGAATTGCTGCTATGCAGCCGATTCACATAGACCCTGAATCGGTGAAGCCACCCAAGAGGAGGAACGTCAAGATATCCAAGGATCCTCAGAGTGTAGCTGCTCGGCACAGAAGAGAAAGGATAAGCGAGAGAATAAGGATATTGCAGAGACTCGTGCCTGGCGGGACTAAAATGGACACGGCATCCATGTTAGATGAGGCTATTCACTACGTCAAGTTCTTGAAATCACAGGTGCAGTCACTAGAGAGAGCAGCATCGAACAGGCCAACACCTGAAATAGGGTTCCCAGTGGCAATGTCTAGTGGAGTAGGTGGCAGTAGCTCTTATCTTCCTTTAGCACAGGCGTACCAGAATCCTCAAAATGTCCATGATCACCTGCATTATGGGGATGCTTAG 801 0.4557 MDSISHLKPEDHMELMMMMMQMDKLPTDFCGSNSDINLNLSSLELSGSSGYFSKFSDNSIMASPNSFPNSPPTKPFFDNISLTQPQDQTRLPPILSPSSNTRGKWRKTGDFSTIDAFAISMEKQNSMASMREMIFRIAAMQPIHIDPESVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKSQVQSLERAASNRPTPEIGFPVAMSSGVGGSSSYLPLAQAYQNPQNVHDHLHYGDA* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02537 266 Gene3D - 159 225 IPR036638 GO:0046983
Pte1g02537 266 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 10 249 IPR045843 GO:0003700|GO:0006355
Pte1g02537 266 SMART finulus 166 215 IPR011598 GO:0046983
Pte1g02537 266 MobiDBLite consensus disorder prediction 87 106 - -
Pte1g02537 266 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 160 209 IPR011598 GO:0046983
Pte1g02537 266 FunFam BHLH transcription factor 163 226 - -
Pte1g02537 266 Pfam Helix-loop-helix DNA-binding domain 169 209 IPR011598 GO:0046983
Pte1g02537 266 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 164 218 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02537 Pte-Chr1 45820453 45821253 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02537 127 220 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G67060 92.553 1.49e-47 156
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g02537 HLH 1.6e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02537 - - vvi:100247090 246.514
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02537 1 45820453 45821253 Pte1g02537 1 45820453 45821253 RCT