LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g02534	ATGACAGACTATGCATTTCTCAACGATGAGCTTTCCAAGCGTACCTCCATTTTTGGTTTGCGCTTGTGGGTAGTTCTTGGCATTGGTGTAGGAGCAGCCATTGTTCTTGTACTCTTTCTCATTTCGCTATGGTTTACTTCGCGCCGTAACAATTCCTCTAAGCTTAACTCATTGCAAAAACCCACTATTCCCAACGTTTCTAAAGAGATCCAGGAAATCCGTGTTGACCACTCTCGCAACCCCACTTACCCTCAGTCTGACCCAAAACAGCATCAACTATCCAACCCGGACCCGTTACCCGAAGCGGAACCGTGGACGTGTAGAGCTCAACCTGTGCTTCTTCAGTCCGAGGATGAAAGCGCTGTTTCTGGACGCAATAGAATTCACATAGAAATTGGGAAAGACCATCGAATTTCGTACCCGGAGAGGGGCGGCGGGTCCTCGCACTCCCACTCACATGGTAGCGTAGAGGCTCGTTCAGGTGATCAAGCTACGATTGTCGTGCCGGAGGTTTCGCATTTGGGTTGGGGCCATTGGTACACTCTCCGCGAGCTTGAGGTTTCTACCAATGGCTTTGCCGACGAGAACGTGATAGGTGAAGGTGGCTATGGAATTGTTTACTGTGGTGTGCTAGAAGGCAACAACAAAGTTGCAGTAAAAAACCTGCTCAACAATAGGGGACAGGCTGAGAGAGAGTTCAAGGTGGAAGTTGAAGCAATTGGACGTGTTCGGCACAAGAACCTAGTAAGATTACTTGGATATTGTGCTGAAGGAGCTCATAGAATGCTGGTGTATGAGTACGTTAACAACGGAAATTTAGAACAGTGGCTTCACGGAGATGTAGGGCCTTGTAGCCCTCTTACCTGGGAAATCAGGATGAATATAATACTTGGAACTGCGAAAGGGTTGACGTATCTACATGAGGGTCTGGAGCCCAAGGTTGTCCACCGTGACATCAAGTCTAGCAACGTACTACTTGATAAACAGTGGAATCCGAAGGTTTCAGATTTTGGCCTAGCGAAGCTTTTGGGTTCAGAAAGGACTTATGTCACAACCCGTGTGATGGGAACATTTGGTTACGTAGCACCTGAGTATGCAAGTACAGGCATGCTGAATGAAAGAAGTGATGTATATAGTTTCGGAATTCTTATCATGGAGATAATTTCTGGGAGAAATCCAGTGGATTATAGCCGACCTCCTGGAGAGGTGAACCTAGTAGAGTGGCTTAAAACCATGGTTACAAATAGAAACACCGAGGGTGTGCTGGATCCTAGGTTGCCTGAGAAGCCTTCTTCGAGGGCACTGAAGCGTGCTTTGTTGGTAGCTTTGCGCTGCGTAGACCCAAATTCTCAGAAAAGGCCGAAGATGGGTCACGTCATACACATGCTTGAAGCTGAGGAATTCCCCTTTCGAGATGACCGTAGAGCTGGACGTATACAGCATGAAGATGTGCGAGGAAGATCATTAGACAAGCGTATATGTGAATCTGGTGACAGCAGTGGATATGAAAGTAATGTCCAAAGCAAATAA	1530	0.4706	MTDYAFLNDELSKRTSIFGLRLWVVLGIGVGAAIVLVLFLISLWFTSRRNNSSKLNSLQKPTIPNVSKEIQEIRVDHSRNPTYPQSDPKQHQLSNPDPLPEAEPWTCRAQPVLLQSEDESAVSGRNRIHIEIGKDHRISYPERGGGSSHSHSHGSVEARSGDQATIVVPEVSHLGWGHWYTLRELEVSTNGFADENVIGEGGYGIVYCGVLEGNNKVAVKNLLNNRGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYVNNGNLEQWLHGDVGPCSPLTWEIRMNIILGTAKGLTYLHEGLEPKVVHRDIKSSNVLLDKQWNPKVSDFGLAKLLGSERTYVTTRVMGTFGYVAPEYASTGMLNERSDVYSFGILIMEIISGRNPVDYSRPPGEVNLVEWLKTMVTNRNTEGVLDPRLPEKPSSRALKRALLVALRCVDPNSQKRPKMGHVIHMLEAEEFPFRDDRRAGRIQHEDVRGRSLDKRICESGDSSGYESNVQSK*	510

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	145	159	-	-
	Pte1g02534	509	ProSiteProfiles	Protein kinase domain profile.	192	471	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02534	509	PANTHER	OS01G0323000 PROTEIN	4	483	-	-
	Pte1g02534	509	Gene3D	Transferase(Phosphotransferase) domain 1	268	477	-	-
	Pte1g02534	509	Gene3D	Phosphorylase Kinase; domain 1	160	267	-	-
	Pte1g02534	509	SMART	serkin_6	192	470	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	78	93	-	-
	Pte1g02534	509	Pfam	Protein kinase domain	193	461	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pte1g02534	509	ProSitePatterns	Protein kinases ATP-binding region signature.	198	220	IPR017441	GO:0005524
	Pte1g02534	509	FunFam	Probable serine/threonine-protein kinase At1g01540	172	267	-	-
	Pte1g02534	509	SUPERFAMILY	Protein kinase-like (PK-like)	173	464	IPR011009	-
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	78	101	-	-
	Pte1g02534	509	FunFam	Putative receptor-like serine/threonine-protein kinase	268	478	-	-
	Pte1g02534	509	CDD	STKc_IRAK	198	464	-	-
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	134	161	-	-
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	479	497	-	-
	Pte1g02534	509	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	314	326	IPR008271	GO:0004672\|GO:0006468
	Pte1g02534	509	MobiDBLite	consensus disorder prediction	479	509	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g02534	Pte-Chr1	45792606	45795774	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g02534	179	495	Trihelix Transcription Factor Family	AT5G38560	44.615	3.56e-88	283

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_RLCK-V	Pte1g02534		Pkinase	1.1e-45	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g02534	-		-	qsa:O6P43_016049	857.055