Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02532 ATGGCAGGACCTAAACCCCTTTCATCAGCTTCACTTCCACTCGGTTGCCGATTCTACCCTTCCGAGGAGCAATTGCTTTGCTATTACCTCACGAACAAGAACAAGATCGATAACACTGTTACAAATGGAGGAGGTGATGCGCTTGGACGTGGAGAAGGAGAGGTTGGTTTCTACGGTTATGATTTGATCAAAGAGCTTGACTTGTACGATTGGGATCCTTTTGATTTACCTGAAGTTTCCTGCTTTCCTTATGGTCATGGAGGTAGAAAGAGGCACTGGTATTGTTATACCACACTTAGTACTATTGGTGGCGCTGAAGAGAATGCTAGGAGAATTTGGAGAAGGAATGTCAAGAGTGGGTACTGGAGGAGGAAAGGAAGGATAAGGAACGTGTTTGGTAATGGTGGCAAGCATTTGTTAGGGACAAGGACCGCTTTTATTTTTTATTTGGGGAATTGGAAGAAGGATTCCAGAAAAACCGATTGGGTTTTGCACGAGTATGCTTTGCTTGGTCATCTCAAGGATTCTTTTGTCATATGCCGTGTGTTTGTAAAATCTCATAAGAGAAACAGTACATCAGAGAATGGACTGAGTTCTTGTGCTGAAGAAAGTATTTCAGCTGTTCGCCACATTGGTATTCAACATGATGGATACATCGCACCCAATATTGATGATGTTAAACTACACGATGACACTTCTGTTGAAAGGACGGAGGCAACGTCATCATATGTACCAAAGTTTGTCAATGACCCAAATGAAAATCGTGTTAAGACCACACTGTCTCCTGCTTCTCAATTCGCTCTAACCATCCAGAGCTATCAGCAGGGTAGTTCGTCTCGCCTCGTTGGAGATGCATTGTTTTCTAAATCACAGGGAGATGAATATCTACGTTCCATCTTAGAGGAGGATTTTATAGAGTTAGATGACCTCATAAAATGA 939 0.4249 MAGPKPLSSASLPLGCRFYPSEEQLLCYYLTNKNKIDNTVTNGGGDALGRGEGEVGFYGYDLIKELDLYDWDPFDLPEVSCFPYGHGGRKRHWYCYTTLSTIGGAEENARRIWRRNVKSGYWRRKGRIRNVFGNGGKHLLGTRTAFIFYLGNWKKDSRKTDWVLHEYALLGHLKDSFVICRVFVKSHKRNSTSENGLSSCAEESISAVRHIGIQHDGYIAPNIDDVKLHDDTSVERTEATSSYVPKFVNDPNENRVKTTLSPASQFALTIQSYQQGSSSRLVGDALFSKSQGDEYLRSILEEDFIELDDLIK* 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02532 312 Gene3D NAC domain 21 190 IPR036093 GO:0003677|GO:0006355
Pte1g02532 312 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 12 195 - -
Pte1g02532 312 Pfam No apical meristem (NAM) protein 13 169 IPR003441 GO:0003677|GO:0006355
Pte1g02532 312 ProSiteProfiles NAC domain profile. 12 185 IPR003441 GO:0003677|GO:0006355
Pte1g02532 312 SUPERFAMILY NAC domain 8 185 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02532 Pte-Chr1 45778086 45783011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02532 6 203 NAC Transcription Factor Family AT4G27410 29.091 7.42e-20 86.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pte1g02532 NAM 1e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02532 - - qsa:O6P43_016046 305.449