Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02531 ATGAAGGTGCATCAGTTCGCACGTGGATTTTGGGAGCACGAACCGACCTCCCTCACGCTTGGCTGCAAGCGCTTACGCCCTCTTGCTCCCAAGCTACCCAATGCTGACACTAATAACACTGCTACGGCTACTGCGGTTGCTGCGGCTTTCGATCTCAAAAGCTTCATCAGACCCGAAAGTGGCCCAATCAAACTTGTCGCCTCCGACGATAGAAAGAAAGAAAGTTCACCTCAGGAGGAGAGTCATCCAGGAGGAACGCGGTGGAATCCAACACAAGAACAAATAGGCATACTGGAAATGTTGTATAAAAATGGGATGCGTACTCCAAATGCTCAACAAATAGAGCAGATCACAACGCAGCTGGGAAAATATGGCAAGATTGAAGGAAAGAACGTGTTTTATTGGTTCCAAAATCACAAAGCACGCGAAAGGCAGAAGCAGAAGCGCTATAATCTTGGACTTGGACAGAGTCCGCGTAGCCCTAAAGCTACTAGCAGCGGCAACACCATAAGTTTGGTCACAATGGGATTTGGCTACTCGTCGTTCTCTTTCAGTTACGGGCTTATGGCTATGTCAATCACAGCAAAGCAACCCTCTGGAGTCAGGAATTTAGCTACTGATAAATTTGGCCAGTCCAAAGGCCGATTTGACAATGAAAGATCAGCTCAGAATGCATTCCACGAGTTAAATGGCATGCCGTTGAATGAGAAACCAGTCTATATTGGACGCCACCTACGTGAAGAGGACAGAAGAACTAGAGTGCTGGCTCAGTATTTACAAAAGAGGCCTATTCACATGGCCCTTCAGGAATGCCATGTATGGCTATGTATCCTGGCGGTGCACCGTCTGGGCCAGCATTTTCTATATGGTCAGGCACCTCCAACTGTGATTCCTCCCCAAGGTCAGCAAGGCCAGCGCGCTGGAGGACGCCCTGGAGCAACAGTGAAAAGGAAGGCCGCCATTGCTACCTCCACTAGCGAATCATCTGCGAGCATTTCTCTTGATGATTCTTCTGCTTCTGAGCCATCTGCACAGCGGGAACAACCTACCAAGAAGCCCAAATCCTCTGCTACATCCATTATGGTAGGTGCGGATGTCAAGGTAAATTTTGCACAGCCAGACTTTTTTGATAAAAAACTGCTAAATTCACGATCTTGTGAGATGGAATATGTTCATTATATTCGTCGCCCAACTGTTAAGCATTTAGTAAGAGAATTCTATGCATCTTTTCAATTTGACAAAAATGCTATACATGACAATCTTGATGCATCCATGATTACTTTCAAGTACATATTTTGTACCTTGTCTGACCTCAATATCTTGTTGGGATTCATTACTGAAGATGAATCTGAATCTGACGAATATTTGAACTCTCATTGTGTCATACCTCCTTTATTTAATGTTAGCGATTCTTATGCCACACTCACCAATTTCAATGTTGGAGTTTGGAATAGCCGGAGTACGCAGGATACGCACATCGCTGTTCCTTCGTTGCGATATTTACACCGTTTTATTGCTTGTTCTCTATTTGGTCGCAACGACACTCCTGCTTCTCTGAGTGAGCGGGAGGTGCTTGATATGTGTTTTATTTCATTTCCCACAACAAAAGGCATGTCACCACTCACCCTACTTAAACTTGATGCTATGCACTTACTAGAAGGCACCTCAGTGGAGCCTATTTTTATTGATGTATGTTGCCCACGCACTACTACCCCACTGGTTCATGAGGCACCAGTAGCTCTGCCTCCTCATCAGTGCCACTTGTCTATCCTACTCAGTCACAATTTGATCAGCTCATCTAGCTTCAGCAGCAAATTAATGATCGCTTGGATGATCAGTTCGAAATGCTTAGTGATTTGTCTCGACGTGTGCACAAGATCGAGTTTGAGTGCCGCCGGATCAGTAACCTACTTGGATTTGAACCTCCGGGTTCAACTCCACCTCATTAGGCACCCACACTCGCATGCCATCTCAAACCAACTGATCGTCGAATTCCAGTTTCCTCTTGCATGGATGAGGACCGCTCGCCCAACTCAAGTCGGGTCCAGAGTAGATGACTCACCATGGCGACCTCCCTTTTTGCATATAGGTGTGTCGACACCATGA 2106 0.4606 MKVHQFARGFWEHEPTSLTLGCKRLRPLAPKLPNADTNNTATATAVAAAFDLKSFIRPESGPIKLVASDDRKKESSPQEESHPGGTRWNPTQEQIGILEMLYKNGMRTPNAQQIEQITTQLGKYGKIEGKNVFYWFQNHKARERQKQKRYNLGLGQSPRSPKATSSGNTISLVTMGFGYSSFSFSYGLMAMSITAKQPSGVRNLATDKFGQSKGRFDNERSAQNAFHELNGMPLNEKPVYIGRHLREEDRRTRVLAQYLQKRPIHMALQECHVWLCILAVHRLGQHFLYGQAPPTVIPPQGQQGQRAGGRPGATVKRKAAIATSTSESSASISLDDSSASEPSAQREQPTKKPKSSATSIMVGADVKVNFAQPDFFDKKLLNSRSCEMEYVHYIRRPTVKHLVREFYASFQFDKNAIHDNLDASMITFKYIFCTLSDLNILLGFITEDESESDEYLNSHCVIPPLFNVSDSYATLTNFNVGVWNSRSTQDTHIAVPSLRYLHRFIACSLFGRNDTPASLSEREVLDMCFISFPTTKGMSPLTLLKLDAMHLLEGTSVEPIFIDVCCPRTTTPLVHEAPVALPPHQCHLSILLSHNLISSSSFSSKLMIAWMISSKCLVICLDVCTRSSLSAAGSVTYLDLNLRVQLHLIRHPHSHAISNQLIVEFQFPLAWMRTARPTQVGSRVDDSPWRPPFLHIGVSTP* 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02531 701 MobiDBLite consensus disorder prediction 65 80 - -
Pte1g02531 701 PANTHER WUSCHEL-RELATED HOMEOBOX 4 1 165 IPR044186 GO:0003700|GO:0010067|GO:0010087|GO:0051301
Pte1g02531 701 SMART HOX_1 83 150 IPR001356 GO:0003677
Pte1g02531 701 MobiDBLite consensus disorder prediction 298 358 - -
Pte1g02531 701 MobiDBLite consensus disorder prediction 65 90 - -
Pte1g02531 701 MobiDBLite consensus disorder prediction 319 357 - -
Pte1g02531 701 FunFam WUSCHEL-related homeobox 4 85 152 - -
Pte1g02531 701 CDD homeodomain 86 147 IPR001356 GO:0003677
Pte1g02531 701 Pfam Homeodomain 86 145 IPR001356 GO:0003677
Pte1g02531 701 ProSiteProfiles 'Homeobox' domain profile. 81 146 IPR001356 GO:0003677
Pte1g02531 701 SUPERFAMILY Homeodomain-like 80 150 IPR009057 -
Pte1g02531 701 Gene3D - 85 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02531 Pte-Chr1 45762744 45769144 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02531 1 152 Wox Gene Family AT1G46480 67.296 1.73e-62 205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Pte1g02531 Homeodomain 1.5e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02531 - - vvi:100250666 254.603