Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pte1g02525 | ATGGCCGTGGAGCTTATGAACGGTTACGTGATGAATGATACTTGTACCCCTGAAATGGGCGCTGGAGAAGCCAGCGCTAAGAAAGTGGAGGAAGCTGCGGTTGCCGGAATGGAGAATTGCGAGAAACCTGTGAAGATCGTATCTGATTGTCTTCACCTTCAACAAGTACCAGAAACGCCATCTTCTCCCGGCTCTTCGAACTTCAAGGAAGTGACTTCAGAATTCAAAGAGGCCGAGACTGTAGCCACGAATAACCTTTTAGAGGTCATCTCATTGCATGAGAAGCCAAGGACCGGACACGCTCGTTTCAGGAAGAGTCCTGTTCCTTCATCATCTCCCTTGTTGTCGGAGTCACCTGCCGCAGCTCCTCCGTCTCCTACTTCTTCCAAATGGCAGAGAAACCATTCTCTTGAGCATCCAGGAATTCAAAAGAAACCAGCGGCAGTGTCGGCCTTCAAAGTTTACTGTCCTAAACCTGTCCTACGTCCTCCTCCTGTTGCTCCTCTGTATCAGAGTCACTATCAGGTGGACCAAACCAAGCCATTGCAGCAGCAACTGAATCATGTGGGGACTGATATTCCAAATTTGTTGGCGGGAGGAGGATTTCTAGAAAAGAATGACACAGGCACAGGGGGACCTAGCAACAAAGATTCAGCTTCCCTTCCTGCTTCTGTATCCATTTCTTCCATGTCTTCAAAAGCAGGGGAGACTAACAACTCACATTCGCAGCGACTAGCAACTTTGTCTAAGGTTCCCCTGTCAAATTCAAGCTGCAACCCGATGTGCAATGCTGCACTCAAGTGCAGGACTCCATCCGAGACTTGCGCCAGAAAGAGAAAATCGAAGACTAGGAAAGCAATTAGGGTTCCTGCTATTAGCCATAGAAAAACTGAAATCCCTGCTGATGAGTATACCTGGAGAAAATACGGTCAAAAACCTATCAAGGGCTCACCCTATCCCAGGTGTGTAGTAAAATCAACACTGATGAAAAGCCAGGCCTGA | 1002 | 0.48 | MAVELMNGYVMNDTCTPEMGAGEASAKKVEEAAVAGMENCEKPVKIVSDCLHLQQVPETPSSPGSSNFKEVTSEFKEAETVATNNLLEVISLHEKPRTGHARFRKSPVPSSSPLLSESPAAAPPSPTSSKWQRNHSLEHPGIQKKPAAVSAFKVYCPKPVLRPPPVAPLYQSHYQVDQTKPLQQQLNHVGTDIPNLLAGGGFLEKNDTGTGGPSNKDSASLPASVSISSMSSKAGETNNSHSQRLATLSKVPLSNSSCNPMCNAALKCRTPSETCARKRKSKTRKAIRVPAISHRKTEIPADEYTWRKYGQKPIKGSPYPRCVVKSTLMKSQA* | 334 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pte1g02525 | 333 | SMART | WRKY_cls | 300 | 333 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02525 | 333 | MobiDBLite | consensus disorder prediction | 208 | 243 | - | - | |
Pte1g02525 | 333 | MobiDBLite | consensus disorder prediction | 109 | 134 | - | - | |
Pte1g02525 | 333 | MobiDBLite | consensus disorder prediction | 96 | 134 | - | - | |
Pte1g02525 | 333 | PANTHER | WRKY TRANSCRIPTION FACTOR 21-RELATED | 29 | 327 | IPR044810 | GO:0003700 | |
Pte1g02525 | 333 | Pfam | WRKY DNA -binding domain | 302 | 322 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02525 | 333 | MobiDBLite | consensus disorder prediction | 200 | 243 | - | - | |
Pte1g02525 | 333 | SUPERFAMILY | WRKY DNA-binding domain | 295 | 322 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02525 | 333 | Gene3D | WRKY domain | 286 | 333 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Pte1g02525 | 333 | ProSiteProfiles | WRKY domain profile. | 295 | 333 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pte1g02525 | Pte-Chr1 | 45692168 | 45694176 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pte1g02525 | 1 | 321 | WRKY Transcription Factor Family | AT4G24240 | 32.938 | 6.31e-38 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | WRKY | Pte1g02525 | WRKY | 9.7e-07 | CL0274 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pte1g02525 | - | - | qsa:O6P43_016034 | 184.496 |