Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02525 ATGGCCGTGGAGCTTATGAACGGTTACGTGATGAATGATACTTGTACCCCTGAAATGGGCGCTGGAGAAGCCAGCGCTAAGAAAGTGGAGGAAGCTGCGGTTGCCGGAATGGAGAATTGCGAGAAACCTGTGAAGATCGTATCTGATTGTCTTCACCTTCAACAAGTACCAGAAACGCCATCTTCTCCCGGCTCTTCGAACTTCAAGGAAGTGACTTCAGAATTCAAAGAGGCCGAGACTGTAGCCACGAATAACCTTTTAGAGGTCATCTCATTGCATGAGAAGCCAAGGACCGGACACGCTCGTTTCAGGAAGAGTCCTGTTCCTTCATCATCTCCCTTGTTGTCGGAGTCACCTGCCGCAGCTCCTCCGTCTCCTACTTCTTCCAAATGGCAGAGAAACCATTCTCTTGAGCATCCAGGAATTCAAAAGAAACCAGCGGCAGTGTCGGCCTTCAAAGTTTACTGTCCTAAACCTGTCCTACGTCCTCCTCCTGTTGCTCCTCTGTATCAGAGTCACTATCAGGTGGACCAAACCAAGCCATTGCAGCAGCAACTGAATCATGTGGGGACTGATATTCCAAATTTGTTGGCGGGAGGAGGATTTCTAGAAAAGAATGACACAGGCACAGGGGGACCTAGCAACAAAGATTCAGCTTCCCTTCCTGCTTCTGTATCCATTTCTTCCATGTCTTCAAAAGCAGGGGAGACTAACAACTCACATTCGCAGCGACTAGCAACTTTGTCTAAGGTTCCCCTGTCAAATTCAAGCTGCAACCCGATGTGCAATGCTGCACTCAAGTGCAGGACTCCATCCGAGACTTGCGCCAGAAAGAGAAAATCGAAGACTAGGAAAGCAATTAGGGTTCCTGCTATTAGCCATAGAAAAACTGAAATCCCTGCTGATGAGTATACCTGGAGAAAATACGGTCAAAAACCTATCAAGGGCTCACCCTATCCCAGGTGTGTAGTAAAATCAACACTGATGAAAAGCCAGGCCTGA 1002 0.48 MAVELMNGYVMNDTCTPEMGAGEASAKKVEEAAVAGMENCEKPVKIVSDCLHLQQVPETPSSPGSSNFKEVTSEFKEAETVATNNLLEVISLHEKPRTGHARFRKSPVPSSSPLLSESPAAAPPSPTSSKWQRNHSLEHPGIQKKPAAVSAFKVYCPKPVLRPPPVAPLYQSHYQVDQTKPLQQQLNHVGTDIPNLLAGGGFLEKNDTGTGGPSNKDSASLPASVSISSMSSKAGETNNSHSQRLATLSKVPLSNSSCNPMCNAALKCRTPSETCARKRKSKTRKAIRVPAISHRKTEIPADEYTWRKYGQKPIKGSPYPRCVVKSTLMKSQA* 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02525 333 SMART WRKY_cls 300 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02525 333 MobiDBLite consensus disorder prediction 208 243 - -
Pte1g02525 333 MobiDBLite consensus disorder prediction 109 134 - -
Pte1g02525 333 MobiDBLite consensus disorder prediction 96 134 - -
Pte1g02525 333 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 29 327 IPR044810 GO:0003700
Pte1g02525 333 Pfam WRKY DNA -binding domain 302 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02525 333 MobiDBLite consensus disorder prediction 200 243 - -
Pte1g02525 333 SUPERFAMILY WRKY DNA-binding domain 295 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02525 333 Gene3D WRKY domain 286 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02525 333 ProSiteProfiles WRKY domain profile. 295 333 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02525 Pte-Chr1 45692168 45694176 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02525 1 321 WRKY Transcription Factor Family AT4G24240 32.938 6.31e-38 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g02525 WRKY 9.7e-07 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02525 - - qsa:O6P43_016034 184.496