Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02520 ATGGCCAATAGAGATCTTCCGGTCAACGGTAAGCGGTCGGAGTTGTTACTTCTCAAGTCCGGAAATCTTGTCCTGTCAGATGCGGGAAAGTCCATCATTTGGGCCACCAACACAACCTCTAATGGCTTTGCCCAGCTGCTTCTCGACGATGCAGGCAATCTAATTCTGCGAGATTCACAAAGTATTGTTCTGTGGCAAAGTTTTGATTTTCCCACGGATACCTTGCTCCCTTACCAAAATCTCACCAGATTCACTCAACTTGTCTCTTCAAGAAGACGAGGCAGCTATTTCACTGGTTACTACAAGATGTTCTTTGACAATGGTAATCTTCTACGTCTTCTTTATGACGGTCCTGATGTTTCCAGCATTTACTGGCCATATCCATGGCTTCTCAGCCGTCAAGCTGGAAGGAACGCAGACAACAATACCAGGATCGCGTTTTTCGATCCCTTGGGCAAATTTAGCTCATCCGACAGTTTTTCTTTCATAACATCTGATTATGGGAGAGTGCTTCAAAGAAGATTGAAGCTTGACTTTGATGGTAATGCCAGAATGTACAGTCGGGAGAGTTTGCAAGCGGATTGGTACGTGTCCTGGGAAGTCAAACTGCAACCTTGTCAGATCCATGGTATGTGTGGGCCTAATACTACATGCGGCTATGATCCTCGTACAGGTGGAAACTGTGCTTGTCTTCCGGGTTACAAACGGATAAATGCTACGGATTGGTCTTATGGGTGCGAACCAGATTTCCAACTTTCTTGCAGGGCAAACGAGTCTCGATTCTTGCGTATAAAAAATCTTGACTTCTATGGCTATGACTACGGCGCTTATTTCAATTATACATACAAGGAATGCAAAAGTTTGTGTCTTCAACTGTGCAATTGCAAAGGCTTCCAGCATTCCTTCACCGCTGGTGACAATGGGGCTTTTACTTGTTACCCCAAAACTCTCTTGCTTAATGGGTATAATTCCCCAAATTTTGATGGCAATTTCTTTCTGAGATTACCCAAAAATGACTTCATCTCAAATGCAGAAACGTTTCAACGGCAAGTAGACAACAGTAGATGCTCTAACCCAAGTGGATTGCAACTCGACAGAGTATATACAGAAGGCCAAGAAAATGCAACTGTCAAGTTCGTGCTTTGGTTCGCTTCAGGAATGGGAAGTTTCGAGGTTGTAATCATATTACTAGTATGGTGTTTCTTCATTAGAAACCAACAAAAATCTCCTAGAGATTCCCAAGGAAACTTGTATGTTGCCACTGGATTCAGAAAATTCAGCTACCAAGAGCTTAAAGAAGCTACAAAAGGCTTCAGTGAAGAGATTGGAAGAGGTGCTGGAGCAACTGTCTACTTGGGTGTATTGTCAGATCATCGAGTAGCCGCAATAAAATATCTTAATGGGGCTGATCAAGGGGAACAAGAATTTCTGGCTGAAGTAAATGTCATTGGCAGGCTCAATCACATGAATTTAATTGAGATGTGGGGATATTGCGTAAAGGGCAAGCATAGGCTACTGGTGTATGAGTATATGAAACTTGGTTCTTTGGCGGACAATATACAGTCGAAAGCTCTGAATTGGAGGAAAAGGTATGACATTGCTTTAGGCATTGCCAGAGGTCTTGCTTATCTCCACGAAGAGTGCTTGGAGTGGATTTTGCACTGTGACGTGAAGCCTCAAAATATACTGCTAGACACTGATTATCAACCCAAGATAGCTGATTTTGGGCTATCAAAACTGCTCAAAAGAAATGACCTTAATGCATCAAGCTTCTCAAGAATAAGAGGCACCAGAGGTTACATGGCTCCTGAATGGGTTTATAATGCACCAATTACCTCAAAGGTGGATGTGTACAGTTACGGGATTGTCGTGCTGGAGATGCTGACTGGGAAGAACCCTGCAATGGGCATCCAATCTAATGAGGATGGAGGAGAGGCTAAGCACACGAGGCTAGTCACTTGGGTGAGGGAGAAAAGGCGTAGTAGGTCTGGTACAGGCACACCGTGGGTGGAGCAAATCATCAATCCTATGGTGGAAGGAGACTACGATGCCATTAAGATGGAAATTTTAGCTGAAACGGCTTTGGATTGTGTTAATGAGGATAGAGAAACAAGGCCCTCCATGAGCCAAGTGGTCAAAATTCTCGAAAACTGA 2154 0.4369 MANRDLPVNGKRSELLLLKSGNLVLSDAGKSIIWATNTTSNGFAQLLLDDAGNLILRDSQSIVLWQSFDFPTDTLLPYQNLTRFTQLVSSRRRGSYFTGYYKMFFDNGNLLRLLYDGPDVSSIYWPYPWLLSRQAGRNADNNTRIAFFDPLGKFSSSDSFSFITSDYGRVLQRRLKLDFDGNARMYSRESLQADWYVSWEVKLQPCQIHGMCGPNTTCGYDPRTGGNCACLPGYKRINATDWSYGCEPDFQLSCRANESRFLRIKNLDFYGYDYGAYFNYTYKECKSLCLQLCNCKGFQHSFTAGDNGAFTCYPKTLLLNGYNSPNFDGNFFLRLPKNDFISNAETFQRQVDNSRCSNPSGLQLDRVYTEGQENATVKFVLWFASGMGSFEVVIILLVWCFFIRNQQKSPRDSQGNLYVATGFRKFSYQELKEATKGFSEEIGRGAGATVYLGVLSDHRVAAIKYLNGADQGEQEFLAEVNVIGRLNHMNLIEMWGYCVKGKHRLLVYEYMKLGSLADNIQSKALNWRKRYDIALGIARGLAYLHEECLEWILHCDVKPQNILLDTDYQPKIADFGLSKLLKRNDLNASSFSRIRGTRGYMAPEWVYNAPITSKVDVYSYGIVVLEMLTGKNPAMGIQSNEDGGEAKHTRLVTWVREKRRSRSGTGTPWVEQIINPMVEGDYDAIKMEILAETALDCVNEDRETRPSMSQVVKILEN* 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02520 717 ProSiteProfiles Protein kinase domain profile. 436 717 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02520 717 CDD STKc_IRAK 442 717 - -
Pte1g02520 717 Pfam D-mannose binding lectin 2 83 IPR001480 -
Pte1g02520 717 ProSiteProfiles PAN/Apple domain profile. 254 336 IPR003609 -
Pte1g02520 717 PIRSF SRK 1 717 IPR024171 GO:0004674
Pte1g02520 717 PANTHER OS07G0415500 PROTEIN 1 716 - -
Pte1g02520 717 CDD PAN_AP_plant 250 336 - -
Pte1g02520 717 ProSiteProfiles Bulb-type lectin domain profile. 1 69 IPR001480 -
Pte1g02520 717 Pfam S-locus glycoprotein domain 155 236 IPR000858 GO:0048544
Pte1g02520 717 SUPERFAMILY alpha-D-mannose-specific plant lectins 2 85 IPR036426 -
Pte1g02520 717 Gene3D - 6 67 IPR036426 -
Pte1g02520 717 SMART serkin_6 436 714 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02520 717 FunFam S-receptor-like serine/threonine-protein kinase 405 510 - -
Pte1g02520 717 ProSitePatterns Protein kinases ATP-binding region signature. 442 464 IPR017441 GO:0005524
Pte1g02520 717 Pfam Protein kinase domain 439 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02520 717 Gene3D Transferase(Phosphotransferase) domain 1 511 717 - -
Pte1g02520 717 Gene3D Phosphorylase Kinase; domain 1 402 510 - -
Pte1g02520 717 FunFam Putative receptor-like protein kinase 511 717 - -
Pte1g02520 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 552 564 IPR008271 GO:0004672|GO:0006468
Pte1g02520 717 SUPERFAMILY Protein kinase-like (PK-like) 411 715 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02520 Pte-Chr1 45635677 45638900 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02520 426 717 Trihelix Transcription Factor Family AT5G38560 39.597 5.65e-64 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Pte1g02520 Pkinase 5.6e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02520 - - qsa:O6P43_018970 927.161