Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02517 ATGAATGATTCTGAGGCACGCCAAGAGGAGCACCAAGAACACGTCGCCGACGAAGAAGCAGACCGCCTTTTACCTTCACAACCGGACTCGCTATGCTTAACGACATCGTCTTCTTCTTCGTCCTCTACCTCCTCCGACGAATATGAGGACGCTGCTTTCGAACCCCGAGATAAAGTCCTCATAGTCGATTTGGATTCAGCCGACACCGACGATTCAAACACGGCGCCGCCTTTCTCGTGGAAAAAGCTGTGGTTGTTCACCGGTCCAGGGTTCTTAATGAGCATTGCTTTTCTTGATCCGGGAAATCTTGAAGGGGATCTTCAGGCTGGAGCTATAGCCGGTTACTCGCTTCTCTGGTTGCTGATGTGGGCCACGGCTATGGGATTGCTGATTCAGCTATTGTCGGCTAGAATTGGAGTCGCCACCGGTCAACACCTTGCCGAGCTGTGCAGGGATGAGTATCCCGATTGGGCCAGATATGTGCTCTGGTTCATGGCGGAGCTGGCCTTGATTGGAGCTGATATTCAAGAGGTCATAGGGAGTGCCATTGCTATCCAAATACTGAGCCATGACATGTTGCCTCTATGGGCTGGTGTTCTAATAACTGCCTCAGATTGTGTCATATTTCTATTTCTCGAAAACTATGGAGTTAGGCAGTTGGAAGCTGCTTTTGCAATTCTCATTGGAACTATGGCAATTTCCTTTGCATGGATGTTTGGTGATGCAAAGCCTAGTGGAAAAGAACTTTTAATAGGTATTCTGGTTCCTAGACTAAGCTCAAAAACAATTCGCCAGGCTGTGGGGGTTGTGGGCTGTGTTATAATGCCTCACAATGTGTTTCTGCACTCTGCTCTGGTTCAGTCGAGGAAAATTGATCCTAAAAAGATAGGTCGCGTCCAAGAGGCTCTCAACTATTACTCAATTGAGTCATCAGTTGCGCTTTCAATTTCTTTCATGATCAATCTGTTTGTAACAACAGTTTTTGCAAAGGGTTTTTACGGTAGTAAAAAGGCAAATAGCATAGGATTAGTGAATGCAGGGAATTATCTAGAGGAGAAGTATGGAGGAGGACTCTTCCCTATACTTTATATATGGGGTATTGGGTTGCTTGCAGCTGGACAGAGCAGTACCGTTACTGGCACCTATGCCGGGCAGTTTATAATGGGTGGGTTTCTAAATCTGCGTCTGAAGAAGTGGATGAGGGCATTGATCACTCGAAGTTTTGCTATTGTGCCAACTATGGTTGTCGCTGTCATTTTTAATACATCAGAAGCTTCACTAGATATATTAAATGAATGGCTCAATGTGCTACAATCTATACAAATTCCTTTTGCCCTCATTCCTCTTCTTACTTTGGTGACAAAAGAGCAGGTTATGGGGACCTTTAAAATTGGATCACTTCTTGAGAGGGTTGCATGGAGTGTGGCACTGCTGATAATGGTGATTAATGGGTATCTACTGCTGGATTTCTTCCTCTCGGAAGTGAATGATGTGCTTTTAGGTTTTCTGGTCTGCATTTTCACAGTGGCATACTTAGCGTTTATTCTGTATCTAGTTATGCACAGTGGTGTTCTTCCGTCTTCTTGGGTTAGCCCCATCTTCAAGGAACTTTTTGCTGCTGCAAAGGGCGCAAAAATTCCATGTTGA 1647 0.4517 MNDSEARQEEHQEHVADEEADRLLPSQPDSLCLTTSSSSSSSTSSDEYEDAAFEPRDKVLIVDLDSADTDDSNTAPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARIGVATGQHLAELCRDEYPDWARYVLWFMAELALIGADIQEVIGSAIAIQILSHDMLPLWAGVLITASDCVIFLFLENYGVRQLEAAFAILIGTMAISFAWMFGDAKPSGKELLIGILVPRLSSKTIRQAVGVVGCVIMPHNVFLHSALVQSRKIDPKKIGRVQEALNYYSIESSVALSISFMINLFVTTVFAKGFYGSKKANSIGLVNAGNYLEEKYGGGLFPILYIWGIGLLAAGQSSTVTGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTMVVAVIFNTSEASLDILNEWLNVLQSIQIPFALIPLLTLVTKEQVMGTFKIGSLLERVAWSVALLIMVINGYLLLDFFLSEVNDVLLGFLVCIFTVAYLAFILYLVMHSGVLPSSWVSPIFKELFAAAKGAKIPC* 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02517 548 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 49 520 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 162 188 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 217 238 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 266 289 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 435 454 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 192 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 401 418 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 PRINTS Natural resistance-associated macrophage protein signature 373 392 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 81 459 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 Coils Coil 1 21 - -
Pte1g02517 548 NCBIfam Nramp family divalent metal transporter 88 457 - -
Pte1g02517 548 Hamap Divalent metal cation transporter MntH [mntH]. 68 491 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 Pfam Natural resistance-associated macrophage protein 104 465 IPR001046 GO:0016020|GO:0030001|GO:0046873
Pte1g02517 548 MobiDBLite consensus disorder prediction 1 51 - -
Pte1g02517 548 MobiDBLite consensus disorder prediction 28 48 - -
Pte1g02517 548 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02517 Pte-Chr1 45608531 45611961 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02517 45 522 Inorganic Solute Cotransporters AT1G47240 81.628 0.0 815
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02517 K21398 - qsa:O6P43_016014 868.611
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02517 1 45608531 45611961 Pte1g02517 1 45608531 45611961 RCT