Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02505 ATGAGCTGCAACGGCTGCCGAGTGCTTAGAAAGGGATGCAGCGAGACTTGCATGTTGAGGTCTTGCCTGAAATGGATAGACTGTCCAAACGCTCAGGGCCATGCCACTTTGTTCCTCGCTAAGTTCTTTGGCCGGAGTGACCTTATGTCCTTCATTTCTTCCGTCCCAGAAAACAAGAGATCAGCGCTGTTTCAGTCACTCCTGTTCGAAGCATGTGGGCGCACGGTGAATCCCGTGAACGGAGCCCTGGGGCTACTTTGGAGCGGCAACTGGCACGTGTGTCAGGCTGCGATGGAGACGGTTCTAACCGGAGGTATCCTCCGCCCTTTACCGAATATTCCTACGGGAGCTGAGGTGCCGGTACAGGACGAATCTTCCCAGTCGGTTTATTTGGACGGGTGCGACCTCCGGAGCGTTTTCAGTTCTCAATCGAAGCTGCTTACGCATGATTTGCCCGTCGGAGGAACGAAGCAAGCTTCACAACTTAATATTTCTCTGGTATCAGACTTCGTAAAAAAATTTAGTGTTGGAGGGGAAAAACCTAGTCGCTGTCCAACTTCGAAGAGGCGGAGGGATCTGACGTCGTCGTTCGGTTCAGAGCAGGAGGCGGAGAGGACTGGCTTTCTATTATACGGCAGTCGGGGCAACAACCACAAGAAACTTTTGAATCTCTTTGTCTGA 681 0.5198 MSCNGCRVLRKGCSETCMLRSCLKWIDCPNAQGHATLFLAKFFGRSDLMSFISSVPENKRSALFQSLLFEACGRTVNPVNGALGLLWSGNWHVCQAAMETVLTGGILRPLPNIPTGAEVPVQDESSQSVYLDGCDLRSVFSSQSKLLTHDLPVGGTKQASQLNISLVSDFVKKFSVGGEKPSRCPTSKRRRDLTSSFGSEQEAERTGFLLYGSRGNNHKKLLNLFV* 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02505 226 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Pte1g02505 226 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 202 - -
Pte1g02505 226 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02505 Pte-Chr1 45544110 45545467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02505 1 227 AS2 family AT5G67420 44.906 2.02e-69 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pte1g02505 LOB 1.1e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02505 - - rcu:8288504 242.276