Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02503 ATGGAACCCATTGGTGCTTTACTTGATGGTGAATGGGATTGCTTTCAGAAAATGTTTGCTGCCGAAGAGTTTGTATTCACTTCGCATCCATTTCTGGGCCAGGGTCAACTCTTGCTTGGACAGGATGAGGAAGTCAACCTTGGCATTCATTCTATGGTTTCCCCACCCCTTGAAGTTAACATAAGCATGCTTGACGCAAATGAGAATCTAGTTTACTCTTCAGAATCTCTCAACTCTTACACCGTCCAGTCTTTTTCACAACAAAGCACTTATAATTGCCCCTCGACCACTCATTCTGCTAATATTCTAGCAAGTGATCCTAACTGCATGTACATGGATATCCCATCTGTGGAGGAGATATGCGCTTTCAGCTCATCATCACTTGCTGACATGATGATGGAAGACACTGCTCACTTGGATGAAGAGAGTAATGGAAATGTTACGGTGATAATGAACCCTCCACATCAACCAGATTCACTTGCAATTCCCGGAAACCAGATGACCCTGAAAAGGAAGCTCGAGGCTCAAGAATTGCCGGGCTGTACAGAGGATAACAGCAACACTAGTGCTGAGAATCAGAAGAAGAAACCTCGAGTTTCAAGAGAGGTGCAACGGGCTAAGAGGAACACACAGCCAAAGAAAAGCCATAAACAAATTTCCCATGCCAATGTGGAAGAAGAGATTCACGCTGCGACATCAGCTGGACAGAGTGACAGCAGTTGCAGTACAGAGGAAGATAGTGCCTCGCATGAAATGAATGGCGGGGTGACTTCGTCTTGTATTGCCTCTGCAGCTCTCCATTCCAATGGCAAGACTCGAACCAGTAGGGGTTCAGCCACAGATCCCCAAAGCCTTTACGCAAGGAAAAGGAGAGAGAGAATAAATGAGCGTCTAAGAATCCTACAGAATCTCGTCCCAAATGGCACAAAGGTCGATATCAGTACCATGCTCGAAGAGGCTGTACATTACGTGAAATTCTTACAGCTCCAAATTAAGCTCTTGAGCTCGGATGACCATTGGATGTACGCCCCCATTGCTTACAATGGAATGGATATGGGTCTCAACCTCCACGTGAAGATTCCTTCAACATTGTGA 1095 0.4557 MEPIGALLDGEWDCFQKMFAAEEFVFTSHPFLGQGQLLLGQDEEVNLGIHSMVSPPLEVNISMLDANENLVYSSESLNSYTVQSFSQQSTYNCPSTTHSANILASDPNCMYMDIPSVEEICAFSSSSLADMMMEDTAHLDEESNGNVTVIMNPPHQPDSLAIPGNQMTLKRKLEAQELPGCTEDNSNTSAENQKKKPRVSREVQRAKRNTQPKKSHKQISHANVEEEIHAATSAGQSDSSCSTEEDSASHEMNGGVTSSCIASAALHSNGKTRTSRGSATDPQSLYARKRRERINERLRILQNLVPNGTKVDISTMLEEAVHYVKFLQLQIKLLSSDDHWMYAPIAYNGMDMGLNLHVKIPSTL* 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02503 364 SMART finulus 284 333 IPR011598 GO:0046983
Pte1g02503 364 MobiDBLite consensus disorder prediction 267 282 - -
Pte1g02503 364 MobiDBLite consensus disorder prediction 180 255 - -
Pte1g02503 364 FunFam Basic helix-loop-helix transcription factor 279 336 - -
Pte1g02503 364 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 277 344 IPR036638 GO:0046983
Pte1g02503 364 Gene3D - 280 339 IPR036638 GO:0046983
Pte1g02503 364 Pfam Helix-loop-helix DNA-binding domain 288 328 IPR011598 GO:0046983
Pte1g02503 364 CDD bHLH_AtIND_like 279 341 - -
Pte1g02503 364 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 278 327 IPR011598 GO:0046983
Pte1g02503 364 MobiDBLite consensus disorder prediction 230 255 - -
Pte1g02503 364 MobiDBLite consensus disorder prediction 189 209 - -
Pte1g02503 364 MobiDBLite consensus disorder prediction 267 288 - -
Pte1g02503 364 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 100 352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02503 Pte-Chr1 45530025 45531581 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02503 186 354 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G33880 56.742 1.62e-56 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Pte1g02503 HLH 1.8e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02503 - - qsa:O6P43_015996 305.064