Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02494 ATGAGCACAAAAAGGAAAACCAGAAGACATTTGGTGGGCAATATTGAATTCGAAAAGATGTTGTGTGCTTGCTCGGGAGAGCATTTCAAATTTGAAGAGCCACCGCACTCACCGGAGTCATTGGCAACAAGGGATTTCTCTGCCAGCGGGCTGTCGTCCAGGACAGGTGAGTGGGAATCAAGATTGGAGGACACCCAAGTCGATGAAGCTGAATCCACTTTAAAAGAAGCTCTCTCATTAAACTACGAGGAAGCCAGGGCTTTGTTGGGAAGACTTGAATACCAAAGAGGGAATTTCGATGCTGCCCTTCAAGTGTTTCAGGGAATTGACATTAAGGGTTTAACTCCAAGAATGATCAAGGCTATTGTGGAGAGAACCAGACCTAGAAGAACACGGCAAAATTTTGAGAACGTTCCTTCCAGTGTGATGTCGATGCATTCAGTCAGCCTGCTTCTGGAGGCAATTTTGCTGAAAGCCAAGTCATTGGAGGAGCTTGGGCGATACACTGAGGCCGCAAAAGTGTGCAAAATAATTCTTGACACAGTTGAATCTGCTCTACCTCATGGAATGCTTGAGGATATTGGTCAAGATTGCAAGTTACAGGAAATGCTTCATAAAGCATTGGAGTTACTTCCAAATCTATGGACCAAGGCAGGTTGTCTTGATGAAGCTATCACTGCTTATCGTCGGGCGTTGCTGAAACCTTGGAACTTGGATCCACACCGATTGGCTGGTGTTCAGAAAGATTTAGCAGTAATGCTGATTTATAGCGGCGTTGAATCAAGTGTTAACCCTCAGTTACAACCATATCGTCCAAATATGCCCAAGAGTAATATTGAAGAAGCAATATTTCTGTCAGTAATACTCATGAAAAAGGTGGCACTTCAGGAGATAGATTGGGATGAAGAGATCATGGACCATTTGACATATGCACTATCAATTAGTGGTCTCTTTCAATTGTTAGCAACACACGTCGAGCAGATCCTTCCTGGCGTGTATAACAGATCGGAGAGGTGGTACTTGCTCGCTCTTTGTTATGCTGCAGCTGGACAAAATGAAACAGCACTGAACCTTTTAAAGAAGGTAACCAGTAGTTCAGAAGCTAGACATAAACCCCATTTTCCTTCCCTTCTGCTGGGAGCAAAATTGTGTTCTCAAGATCCATACCATGCCCATGAAGGGATAGTTTTCTCAAACAAGGTCATTGAAAAAGCCAAACAGCAATGTCAATTTTTTCAAGGTCAAGGTCACAAGTTTTTTGGCATTTGTCATGGATGTTTGGCGAGAAAATCTGTATTAGACTCTGAAAGAGTTGTTTTTCAGAGAGAATCTCTAACTTCGCTAAACTATGCTGCTTCGATTGAAAACGATGATCCTGAACTGATCTTTAACCTTGGACTGGAAAATGCAGTTCAAAGAAATATGGGGGCAGCTTTCAACTATGCCATGCAGTATTCTGACATGTTGTCTGGCAGCTCCGTAAAAGGTTGGAGGCTCTTGGCTCTTGTAGTTTCTGCACAACAGCGTTATAAGGATGCTGAAACCATTATTGATTTTGCATTGGATGAGGCCAGTGGCGTAGCTCAGCTGGAACTTCTGAGATTAAAAGCTATGCTTCAAATTGCTCAGCAACTACCCAAGCAAGCAATAGATAGCTATAGAATATTGCTATCTATGATTCAAGCAGAGAAAGAGCTAAAGGTCCAAGCTAAGAACAACGCGCAAGCAAAGACTTCTACCCTTGAGCCATCGATCGAGAGGAAATTGGAAATGTCAGCTTGGCAGGACTTAGCTTCTGTTTATGCTAAGCTTGGTTCTCGGCCTGATGCGGAAACTTGTATTGAAAAAGCTAAGTTGGTGGAATTGTTTTCTCCCAAAAGCTGGCACACCACAGGGATATTGTTGGAGGCTAAATCGTTACACAAGGAAGCGCTCGTTTCATTTTCGACCTCATTGTCAATAGACCCAGATTATGTTCCAAGTATTGTATCTACTGCAGAAATGTTTCTCAAGCTGGGTGGTCAATCCATCCCTGTCGCGAGAAGCTATCTGATGAATGCTATGCGGTTAGAACCAACTAACCATGACGCATGGTTTGCATTGGGATTGCTTTCAAAAAGGGAAGGTTTATCGCAACAAGCAGCAGATTGTTTTCAGGCAGCTCATGAATTAAAGCTCTCTGCTCCGGTGGAAAGGTTTGTGTGA 2205 0.4317 MSTKRKTRRHLVGNIEFEKMLCACSGEHFKFEEPPHSPESLATRDFSASGLSSRTGEWESRLEDTQVDEAESTLKEALSLNYEEARALLGRLEYQRGNFDAALQVFQGIDIKGLTPRMIKAIVERTRPRRTRQNFENVPSSVMSMHSVSLLLEAILLKAKSLEELGRYTEAAKVCKIILDTVESALPHGMLEDIGQDCKLQEMLHKALELLPNLWTKAGCLDEAITAYRRALLKPWNLDPHRLAGVQKDLAVMLIYSGVESSVNPQLQPYRPNMPKSNIEEAIFLSVILMKKVALQEIDWDEEIMDHLTYALSISGLFQLLATHVEQILPGVYNRSERWYLLALCYAAAGQNETALNLLKKVTSSSEARHKPHFPSLLLGAKLCSQDPYHAHEGIVFSNKVIEKAKQQCQFFQGQGHKFFGICHGCLARKSVLDSERVVFQRESLTSLNYAASIENDDPELIFNLGLENAVQRNMGAAFNYAMQYSDMLSGSSVKGWRLLALVVSAQQRYKDAETIIDFALDEASGVAQLELLRLKAMLQIAQQLPKQAIDSYRILLSMIQAEKELKVQAKNNAQAKTSTLEPSIERKLEMSAWQDLASVYAKLGSRPDAETCIEKAKLVELFSPKSWHTTGILLEAKSLHKEALVSFSTSLSIDPDYVPSIVSTAEMFLKLGGQSIPVARSYLMNAMRLEPTNHDAWFALGLLSKREGLSQQAADCFQAAHELKLSAPVERFV* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02494 734 SUPERFAMILY TPR-like 532 725 IPR011990 GO:0005515
Pte1g02494 734 SMART tpr_5 152 185 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 625 658 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 530 563 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 494 527 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 336 369 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 205 238 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 695 728 IPR019734 GO:0005515
Pte1g02494 734 SMART tpr_5 591 624 IPR019734 GO:0005515
Pte1g02494 734 Gene3D Tetratricopeptide repeat domain 618 724 IPR011990 GO:0005515
Pte1g02494 734 Pfam Tetratricopeptide repeat 66 108 - -
Pte1g02494 734 MobiDBLite consensus disorder prediction 42 56 - -
Pte1g02494 734 MobiDBLite consensus disorder prediction 33 61 - -
Pte1g02494 734 Coils Coil 75 95 - -
Pte1g02494 734 ProSiteProfiles TPR repeat profile. 625 658 IPR019734 GO:0005515
Pte1g02494 734 SUPERFAMILY TPR-like 333 550 IPR011990 GO:0005515
Pte1g02494 734 SUPERFAMILY TPR-like 65 180 IPR011990 GO:0005515
Pte1g02494 734 Gene3D Tetratricopeptide repeat domain 290 617 IPR011990 GO:0005515
Pte1g02494 734 Gene3D Tetratricopeptide repeat domain 51 274 IPR011990 GO:0005515
Pte1g02494 734 PANTHER PROTEIN NPG1 20 733 IPR043376 -
Pte1g02494 734 SUPERFAMILY TPR-like 154 363 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02494 Pte-Chr1 45479784 45483478 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02494 20 735 Calmodulin-binding Proteins AT1G27460 60.000 0.0 853
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02494 K21843 - qsa:O6P43_015985 1021.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02494 1 45479784 45483478 Pte1g02494 1 45479784 45483478 RCT