Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02485 ATGTTCTTTGAAGAAGAAGTGCCATGTCCAGTAATAGAAACTGGACTCCTGTCAGCTTGTGAACTACGAGAACTTTATTCTCTCATTCAGTCACCTGAATCGCTCAGCCTGAGCTCTGGTTCGAAGGGGTCAAGCCGGGCTGTTTACTCAGTCGATGAGAGAAAACGTAGGCGTATGGTATCAAACCGCAAATCCGCCAGACGATCCCGCTGGAGAAAGAAGAGACATTTGGAGAACCTCTCGGACGAACTGAGCCGGTTGAAAACTGAGAACCAAGAAGCGCAGAACCGGTTGCACCAAGTCTTGTACCGTTCTCTCGTATTACATAGTGAAAATAACAGATTGAAGTCGGAATCGATTTCCCTAGAGGCCAAACTATCCCATCTTTGCTTTCTTCTAAGCTTTAACTCCCATGGCCATGCAGCGTGCCCAATAATCTCCAACCAATATCACTAA 456 0.4649 MFFEEEVPCPVIETGLLSACELRELYSLIQSPESLSLSSGSKGSSRAVYSVDERKRRRMVSNRKSARRSRWRKKRHLENLSDELSRLKTENQEAQNRLHQVLYRSLVLHSENNRLKSESISLEAKLSHLCFLLSFNSHGHAACPIISNQYH* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02485 151 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 57 72 IPR004827 GO:0003700|GO:0006355
Pte1g02485 151 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 52 101 IPR004827 GO:0003700|GO:0006355
Pte1g02485 151 Coils Coil 70 104 - -
Pte1g02485 151 SMART brlzneu 50 114 IPR004827 GO:0003700|GO:0006355
Pte1g02485 151 SUPERFAMILY Leucine zipper domain 54 101 IPR046347 GO:0003700|GO:0006355
Pte1g02485 151 CDD bZIP_plant_GBF1 55 102 IPR045314 GO:0003700|GO:0006355
Pte1g02485 151 PANTHER BZIP TRANSCRIPTION FACTOR 44 38 132 - -
Pte1g02485 151 Gene3D - 52 105 - -
Pte1g02485 151 FunFam BZIP transcription factor 52 103 - -
Pte1g02485 151 Pfam Basic region leucine zipper 52 100 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02485 Pte-Chr1 45363888 45365149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02485 45 118 bZIP Transcription Factor Family AT2G22850 54.667 2.92e-18 76.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pte1g02485 bZIP_2 9.5e-08 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02485 - - pvy:116139881 110.923