Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02474 ATGGGCAGGGCTCCTTGCTGTGACAAGGCAAACGTGAAGAAAGGGCCATGGTCACCTGAAGAAGACGCCAAGCTCAAGTCTTATATTGAACAGCATGGGACTGGTGGCAATTGGATCGCTTTACCTCAAAAGATTGGCCTTAAGAGATGTGGGAAGAGTTGCCGTCTCAGATGGTTGAACTATCTTCGCCCTAACATAAAGCATGGAGGTTTCTCCGAAGAAGAAGACAACATTATATGTAACCTCTACTCTAGTATCGGAAGCAGATGGTCTGTCATCGCGGCCCAATTACCGGGAAGAACTGACAACGATATCAAGAACTACTGGAACACAAGGCTGAAGAAAAAGCTTCTTGGCAAGCACCGAAAAGAACAGCAGACACGTGTCAACAATAGTTTGAAGCAACCACTCATCAATAGAGGAAGCTTTATGAATTCTGCGGTTCCTGGCGAAACTACTGGTGAGCAGCCATATTGGCCGGAGCTTCCTGTGCTAGCTCATGGATCCTATACGACGAACGAACCATCTTTCAATGACCATGATTCTATTAAAAAACTACTCATCAAGCTTGGTGGAAGATTTTCTGATGACAAAGAAGATGCCCTTGAAGGCAAACATTTACAGTTTCAAGTTGGTCATTATTCTCCAGCGCCAGCACAATCTTATGAACAGCAAGTTACCACGATGCTCTCTTCTGCTTGCTCGAATGCTTTGGACAACGATGCTGTACAACTTACACACAACCAGTACTTCGTGAATGAAGCAGCACTCACAATGGTTCAAGGAGAAAATACTTTAGGAGCGGGGTTTATTATTGAGGATATGGTCGTGACTGCCAATCCGCAACGATTCGATGGGTTGGAGTTCTTGTGTGGTGAAGACATAGTCAATTACAAGATGGGATATTCTGGTAGCCTTGGCACTTGCTGGGGAGAGACTAGCTCACAGTCACAGATCTATCCTTGTTTTGTACCTTCAAGTTATGAAGATATGCGACAAGAGCTGCCACAAGAATGTTCTTTCCAAGAACTTAGATGCCAGGAGGCTCAGTTCCAAGCTGTACATTTGTAG 1071 0.4482 MGRAPCCDKANVKKGPWSPEEDAKLKSYIEQHGTGGNWIALPQKIGLKRCGKSCRLRWLNYLRPNIKHGGFSEEEDNIICNLYSSIGSRWSVIAAQLPGRTDNDIKNYWNTRLKKKLLGKHRKEQQTRVNNSLKQPLINRGSFMNSAVPGETTGEQPYWPELPVLAHGSYTTNEPSFNDHDSIKKLLIKLGGRFSDDKEDALEGKHLQFQVGHYSPAPAQSYEQQVTTMLSSACSNALDNDAVQLTHNQYFVNEAALTMVQGENTLGAGFIIEDMVVTANPQRFDGLEFLCGEDIVNYKMGYSGSLGTCWGETSSQSQIYPCFVPSSYEDMRQELPQECSFQELRCQEAQFQAVHL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02474 356 ProSiteProfiles Myb-like domain profile. 9 62 IPR001005 -
Pte1g02474 356 FunFam Transcription factor MYB36 70 153 - -
Pte1g02474 356 SUPERFAMILY Homeodomain-like 11 109 IPR009057 -
Pte1g02474 356 CDD SANT 71 113 IPR001005 -
Pte1g02474 356 PANTHER OS09G0431300 PROTEIN 1 242 - -
Pte1g02474 356 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Pte1g02474 356 FunFam Transcription factor RAX3 7 68 - -
Pte1g02474 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Pte1g02474 356 Pfam Myb-like DNA-binding domain 14 62 IPR001005 -
Pte1g02474 356 Pfam Myb-like DNA-binding domain 69 111 IPR001005 -
Pte1g02474 356 CDD SANT 16 62 IPR001005 -
Pte1g02474 356 Gene3D - 70 137 - -
Pte1g02474 356 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 62 IPR017930 -
Pte1g02474 356 SMART sant 13 64 IPR001005 -
Pte1g02474 356 SMART sant 67 115 IPR001005 -
Pte1g02474 356 Gene3D - 7 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02474 Pte-Chr1 45262211 45263575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02474 1 126 MYB Transcription Factor Family AT5G65790 92.063 2.71e-83 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Pte1g02474 Myb_DNA-binding 2.5e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02474 K09422 - qsu:111997050 386.726