Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02463 ATGGAGACGGACGCAGTCAAACTTGCACTAGAAATGGCTGCCAGAGATCCTACAGCCTTCAACGAAATTCTACCTCATCTGAATCCAAACTTATTTTTTCCCGGCAATTCGTTCAATGTTGATGACCAAAACAATGTGATGGGGGGATTTCCGGTTCTTGCTGCTGCAATGGCTGGTGAATCATCATTCCATAACCAAGTTGGTGGTATTAACTTGATGACCTTAATGTATGATTCCTCATTTGAAAGCAGAAACCTGAGAAATGTGCCACACATTGGCACTTCTGGTAGACAGGTAGGTGAATCTGGGATTCAGGATCAATCAACCGGAGCAACAGGTGTCTCTGCCTCATCACTGGATGCCATTCTCGCTGCAAGAAGTGGTATGCAAGAAAATTTAGAAAAATCAATAGCGTTGACCCCTCCAGTATGTCAGTTGCAACCGCAGACGATTGACATGACTTCCAATGTTTCAGCAAATCCTTTGTATGGATCCTCTGATGGTTGTGGGTATCAAGAACTTCCGAGCAGCATGGACAACTTTCTCAATTCCTCAGAGCTAGGCAGAATCACTGCAAGTAGAGGGTGGCAGAAGCTCCCATCCTCTGGAGACCCGATACCGAATGGATGGTTGCTAACGAACTCTGTAGACTTGAACTTGGAAGGACATGACAGTCTCTCCAATGAACTTTCATTGAGTCTCGCAACGTCTAAACCTCTTCTAGCTGTTAGAATTAACGGTATAGATCAATGCTCAGAAATGAACTGCTCTGATGCAGCACTTGATCATATGAATGCGACCAGGTCTGGGTTGGAAGCATGCAGCAATAGGAGGTTTTCTGTGGGTTCTGGTGCTAATAATCCAGCACAGGCGGTGTTAGGATCGAGATATCTCCCTGCAATTCAGGAAATTCTAGCACAAATTGCAAGGTATTCTCTTGAAAATGTGGATCAAGCACAAGGTTCAGCTGTAGGAATTCCAGCTGGTATTAGCAAATTAACCTCCAACGAAAGAGTGTTAATGGATGCTGACACAGGATTAGAGAATCAAATGATTTCCAGTTCAGAAAGTCATGCCGTTGAAGCAAACAAAACCCGACTATTGACACTTCTACAACTGGTTGATGAGCACTACAATCACTGTGTGGACGAAATACATACTGTTGTATCTGCCTTCCATGCTGCCATTGAATTGGACCCTCGTGTCCATGCTCATTTTGCTCTTCAAACGATCTCTCACTTATTCAAGGGCTTGCGAGAGAGGATTAGCAGTTGTATCCTCGCTGCGGGTTCAAATTTTGACACCTCATCCACAAAACAGAAGGATAATTCTTTTGAATCTTCATCCATCTTGAAGCGATGGGCTCTTCAGCAGTTGAAAAGAAAAGATCATCACATATGGAGACCCCAGAGAGGGTTGCCAGAAAAATCCGTCTCTGTTTTGCGTGCTTGGATGTTTCAGAATTTTCTTCATCCGTATCCTAAAGATGCAGAGAAACATTTGCTAGCTGTGAAAAGTGGGTTGTCTAGAAGCCAGGTTTCCAACTGGTTTATTAATGCGCGTGTTAGACTCTGGAAACCAATGATCGAGGAAATGTGTGCAGAGATGAACAGAAGAAACGCATGTCGAAACGACGAAGGCGATGAAAATAGGCATGGGATCCGCACAAAACCAACCAAAGGTTTAGTATCGATTCAAGCTGAAAGTGCTCTCCAAAGGTCACATGATTGA 1731 0.4391 METDAVKLALEMAARDPTAFNEILPHLNPNLFFPGNSFNVDDQNNVMGGFPVLAAAMAGESSFHNQVGGINLMTLMYDSSFESRNLRNVPHIGTSGRQVGESGIQDQSTGATGVSASSLDAILAARSGMQENLEKSIALTPPVCQLQPQTIDMTSNVSANPLYGSSDGCGYQELPSSMDNFLNSSELGRITASRGWQKLPSSGDPIPNGWLLTNSVDLNLEGHDSLSNELSLSLATSKPLLAVRINGIDQCSEMNCSDAALDHMNATRSGLEACSNRRFSVGSGANNPAQAVLGSRYLPAIQEILAQIARYSLENVDQAQGSAVGIPAGISKLTSNERVLMDADTGLENQMISSSESHAVEANKTRLLTLLQLVDEHYNHCVDEIHTVVSAFHAAIELDPRVHAHFALQTISHLFKGLRERISSCILAAGSNFDTSSTKQKDNSFESSSILKRWALQQLKRKDHHIWRPQRGLPEKSVSVLRAWMFQNFLHPYPKDAEKHLLAVKSGLSRSQVSNWFINARVRLWKPMIEEMCAEMNRRNACRNDEGDENRHGIRTKPTKGLVSIQAESALQRSHD* 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02463 576 MobiDBLite consensus disorder prediction 542 562 - -
Pte1g02463 576 ProSiteProfiles 'Homeobox' domain profile. 464 527 IPR001356 GO:0003677
Pte1g02463 576 CDD homeodomain 467 528 IPR001356 GO:0003677
Pte1g02463 576 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 178 540 - -
Pte1g02463 576 SMART HOX_1 467 531 IPR001356 GO:0003677
Pte1g02463 576 MobiDBLite consensus disorder prediction 93 112 - -
Pte1g02463 576 SMART prehox3 286 424 IPR006563 -
Pte1g02463 576 Pfam Homeobox KN domain 484 523 IPR008422 GO:0003677|GO:0006355
Pte1g02463 576 SUPERFAMILY Homeodomain-like 469 537 IPR009057 -
Pte1g02463 576 MobiDBLite consensus disorder prediction 98 112 - -
Pte1g02463 576 MobiDBLite consensus disorder prediction 542 556 - -
Pte1g02463 576 Pfam Associated with HOX 292 423 IPR006563 -
Pte1g02463 576 Gene3D - 470 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02463 Pte-Chr1 45185749 45188007 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02463 228 539 Homeobox Transcription Factor Family AT4G32980 53.481 5.65e-101 312
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Pte1g02463 POX 2.4e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02463 - - jre:109021085 461.455