Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02459 ATGGTTATGGAGACCCACAGGCAACAACCATCTCCTCCCAGTCATATAAATCAGCTGCAGTATCATAATCAACACCATGGAAGCTCAATCTTGAATGCGGGATCAAGTAACTTCCACCAGATGCCGATTTCACCTTTTCAAATTACCAAAGAAAATAGCAGCATTTGTGGCCACAATTCAGCTTCGCACAAACAATATGAGGAAGAAGATCGCAAAAGAAACAAGATCTCTCCTAAATTGATGCCTGCTTCAGAACCGAGGTCGATGCAGAAAACAGTGACCGAAAACAGCACGGGTACTGATAAATCCATACAAATTTCTCCGCGATTACAGAACCAGCAGCGTCGCTGCCGACACGTCAACGCTAGTACTTCTTCGGTCAACATCGGCAGCAATACGATTAGGGTTTGTGCGGACTGCAACACGACCACTACCCCACTTTGGAGGAGTGGCCCTAGGGGTCCTAAGTCACTTTGCAATGCATGCGGCATCAGGCGACGAAAGCAAAGAAAAGTTATGGCCGAAGTTTCTGTAGCTGCTGCAAATGGTTTGCCTGTACCAGATGCTTCCTCTACAAAAAATAATAGACGGCACAAGAAGGAGAAGAAGCCTCTTGTAAACCAATTAGCTCCGTTCAAGAACAAGTCCAGGTCCGCAGCAGGTGTAGCGACATGTACATCACAAGTGGAGCGTAAGCTTTCTTTCGAGGATTTCACGTTTTGGACCCATAACTCAGCTTTCCGACAAGCCTTTCCTCGAGATGAGGTTGCTGACGCTGCAGTTCTACTGATGGAACTTTCTTGTGGATTTGCTCACCTTTGA 822 0.4647 MVMETHRQQPSPPSHINQLQYHNQHHGSSILNAGSSNFHQMPISPFQITKENSSICGHNSASHKQYEEEDRKRNKISPKLMPASEPRSMQKTVTENSTGTDKSIQISPRLQNQQRRCRHVNASTSSVNIGSNTIRVCADCNTTTTPLWRSGPRGPKSLCNACGIRRRKQRKVMAEVSVAAANGLPVPDASSTKNNRRHKKEKKPLVNQLAPFKNKSRSAAGVATCTSQVERKLSFEDFTFWTHNSAFRQAFPRDEVADAAVLLMELSCGFAHL* 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02459 273 ProSiteProfiles GATA-type zinc finger domain profile. 131 167 IPR000679 GO:0006355|GO:0043565
Pte1g02459 273 MobiDBLite consensus disorder prediction 87 103 - -
Pte1g02459 273 Pfam GATA zinc finger 137 171 IPR000679 GO:0006355|GO:0043565
Pte1g02459 273 ProSitePatterns GATA-type zinc finger domain. 137 162 IPR000679 GO:0006355|GO:0043565
Pte1g02459 273 MobiDBLite consensus disorder prediction 55 103 - -
Pte1g02459 273 PANTHER GATA TRANSCRIPTION FACTOR 22-RELATED 9 272 - -
Pte1g02459 273 MobiDBLite consensus disorder prediction 62 78 - -
Pte1g02459 273 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 131 172 - -
Pte1g02459 273 SMART GATA_3 131 183 IPR000679 GO:0006355|GO:0043565
Pte1g02459 273 Gene3D - 132 206 IPR013088 GO:0006355|GO:0008270
Pte1g02459 273 CDD ZnF_GATA 136 170 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02459 Pte-Chr1 45166782 45169116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02459 133 272 C2C2-Gata Transcription Factor Family AT4G26150 35.542 2.52e-20 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Pte1g02459 GATA 2.2e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02459 - - gmx:100780326 179.874
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02459 1 45166782 45169116 Pte1g02459 1 45166782 45169116 RCT