LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pte1g02458	ATGTTTTTGGATTTCTTTGAGGATCTCTGGCCAATTCTGGGGCTACAGGGTCTATCTGATAAAGCTAACTCTTTCTCAGGTTCTTTTGTCCAGGCATTCTCAGACTCCATGAATCACTCAAATTGTGGAGGTTCCGCAGCAGAGCTCTGTCGAGACGATTCCGCTGCATTCCTTCTCAAATTTGTTGCCATAGCGTCAATACTTCTATCTGGTGCGGCTGGAATTGCCATACCACTCGTCGGAAAACATAGGCGTTTCCTTCGTATAGACGGCAGCCTCTTTGTCGCGGCAAAGGCCTTTGCAGCTGGCGTAATTCTCGCTACTGGGTTTGTCCATATGTTATCGGACGGGTCTAAGACGCTAAATGACCCGTGTTTGCCCCGTTACCCATGGTCCAAGTTTCCTTTTCCGGGTTTTTTTGCAATGATATCCTCTCTTCTTACTCTACTAGTTGACTTCGTGGGAACTCAATACTATGAGAGGAAACAGGGGGTGAACAGGGCAACTGAGGAACAGAGTCGGGTTGGTTCATTGGACTCCGGGTCGGAGTCTGGAATTGTTCCTGTACGTGAGCCTAAGGATTGGAGTGGCATTGGGGTTGGGACTGCCGTTGCTTCAGTCTACAATCCATACAGCTCTGGCGCGCTCATCACTGAAGGTATCCTTGATTGCTTGTCGGCTGGAATTTTGGTATACATGGCTTTAGTGGATCTCATTGCTGCTGATTTTCTAAGTAAGAGGATGAGCTGCAATTTTAGGCTTCAGGTATTATCCTACTGCATGCTTTTCATCGGGGCTGGGTTGATGTCTTCACTGGCAATCTGGGCTTGA	831	0.4789	MFLDFFEDLWPILGLQGLSDKANSFSGSFVQAFSDSMNHSNCGGSAAELCRDDSAAFLLKFVAIASILLSGAAGIAIPLVGKHRRFLRIDGSLFVAAKAFAAGVILATGFVHMLSDGSKTLNDPCLPRYPWSKFPFPGFFAMISSLLTLLVDFVGTQYYERKQGVNRATEEQSRVGSLDSGSESGIVPVREPKDWSGIGVGTAVASVYNPYSSGALITEGILDCLSAGILVYMALVDLIAADFLSKRMSCNFRLQVLSYCMLFIGAGLMSSLAIWA*	277

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pte1g02458	276	PANTHER	ZINC/IRON TRANSPORTER	58	175	-	-
	Pte1g02458	276	Pfam	ZIP Zinc transporter	197	273	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085
	Pte1g02458	276	Pfam	ZIP Zinc transporter	57	173	IPR003689	GO:0016020\|GO:0030001\|GO:0046873\|GO:0055085

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pte1g02458	Pte-Chr1	45161140	45163062	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pte1g02458	197	277	Inorganic Solute Cotransporters	AT1G10970	83.951	6.63e-38	135

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pte1g02458	K14709		-	qsa:O6P43_015904	294.278