Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02453 ATGGGTGCTTCTGGAAGATGGGTAAAATCATGGAAAGGCCTCAAGAAATCTGATAGAGAAGAAAATAGGAAGGAAGGTGGCAAAGGTAGAAGGTGGAAGCTCTGGAGAACTTCCTCTGGGGATTTGAGTTCATGGAAGGGCTTCCAAGGGAATCACAGAGCGGCCTCTGAGGGTTCTGACTCACCGCGACTGCCGGATGCTTATACTGCAGCAGTGGCCACAGTAGTTCGAGCTCAACCAAAAGATTTTCGAGCTGTAAGGGAAGAATGGGCAGCAATCAGGATCCAAACTGCCTTCCGCGGCTTCTTGGCGAGAAGGGCTTTGAAAGCGTTGAAAGGGATAGTTAGGCTCCAAGCACTAGTTCGGGGTCGACAGGTGAGGAAGCAAGCAGCGGTGACATTAAGGTGCATGCAGGCATTAGTTCGAGTTCAAGCCCGAGTCAGAGCACGTCGTGTGAGAATGTCATTAGAGGGCCAGGCCGTGCAAAGCATGCTCAATGAACTTCGCAGCAAAGCTGAACTCCTGAGAGAAGCTGAGGACGGATGGTGTGATAGCAAAGGAACACTAGAGGATGTGAAATCAAAACTCCAAATGAGGCAAGAAGGAGCATTCAAAAGAGAAAGAGCACTTGCATACTCCCTGGCTCAAAAGCAATTGAAATGTACACAAGCATCCATTTCTCAAATTGCACCCTCCGTCTCCACCCTTAAAAATAATAATATTGGTAAGAATAGCTGGAATTGGAGTTGGTTGGAGCGTTGGATGGCAGCAAAACCTTGGGAAAGTAGATTGATGGAACAATCCCAGTCCGACTCAGAAAAAACTCCTCCAAAGAATTGCGTGAAAGAGCCATCTAGTGTGAAAGTCAAAAGGAACAATATCACAACAAGGATTTCCGCGAAGCCTCCTCATGTTGGACGAGCAACGCGGTCATCTTCAAGTCCAAGTTCTGAATTTCGCTTTGATGAGAGTTCAGCTTCCTCTTCTATATGCACCTCTACAACTCCGGTATCAGGGAACACTTTGTTGGCATCAGATAGAACAGAGAATAGTTCAAATAGTAGGCCTAACTATATGAACCTTACCGAGTCGACCAAAGCAAAACAGAGATTAAGTAATTTATCTCAGAGAGCACAAAGGCAATCCATGGATGAGTTCCAGTTTCTCAAGAGGTCTGGAGCTTTATCCCCTGAAGATTCCAAATGCAGTGGAGGAGGTACAGAACCTTGCTCCGTCAACTTTTCAAAGCCACTTTGCTTGCCCACCAGATTAGAGAAGAGCGCGGTCAAACAACGGAGAGATGGAGTGTTACATGTGTAA 1320 0.4659 MGASGRWVKSWKGLKKSDREENRKEGGKGRRWKLWRTSSGDLSSWKGFQGNHRAASEGSDSPRLPDAYTAAVATVVRAQPKDFRAVREEWAAIRIQTAFRGFLARRALKALKGIVRLQALVRGRQVRKQAAVTLRCMQALVRVQARVRARRVRMSLEGQAVQSMLNELRSKAELLREAEDGWCDSKGTLEDVKSKLQMRQEGAFKRERALAYSLAQKQLKCTQASISQIAPSVSTLKNNNIGKNSWNWSWLERWMAAKPWESRLMEQSQSDSEKTPPKNCVKEPSSVKVKRNNITTRISAKPPHVGRATRSSSSPSSEFRFDESSASSSICTSTTPVSGNTLLASDRTENSSNSRPNYMNLTESTKAKQRLSNLSQRAQRQSMDEFQFLKRSGALSPEDSKCSGGGTEPCSVNFSKPLCLPTRLEKSAVKQRRDGVLHV* 440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02453 439 MobiDBLite consensus disorder prediction 11 31 - -
Pte1g02453 439 PANTHER IQ-DOMAIN 5-RELATED 1 391 - -
Pte1g02453 439 MobiDBLite consensus disorder prediction 1 31 - -
Pte1g02453 439 ProSiteProfiles IQ motif profile. 112 139 IPR000048 GO:0005515
Pte1g02453 439 SMART iq_5 110 131 IPR000048 GO:0005515
Pte1g02453 439 SMART iq_5 87 109 IPR000048 GO:0005515
Pte1g02453 439 Gene3D - 43 113 - -
Pte1g02453 439 Pfam IQ calmodulin-binding motif 90 109 IPR000048 GO:0005515
Pte1g02453 439 MobiDBLite consensus disorder prediction 306 380 - -
Pte1g02453 439 ProSiteProfiles IQ motif profile. 88 116 IPR000048 GO:0005515
Pte1g02453 439 MobiDBLite consensus disorder prediction 265 380 - -
Pte1g02453 439 FunFam IQ-domain 11 87 138 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02453 Pte-Chr1 45133154 45135364 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02453 1 426 IQD Protein Family AT2G26180 63.218 1.12e-154 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02453 - - cave:132184703 597.816