Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02437 ATGACTTCAAAGAAGATTAGATGGAAACCTATCATGATCATTTTAAGCTGTTACAGGACTGAAATCTCCTTGCAGGAATCTCAAGAAAAAGGATTGAAACAATGTTCTTTCAGAAGGTTATCCCTGTCAGACGCATGTGATGATTCACGGGGAATTGATGACATCTCAAATTCCTTTGTAGGAGCGAAGCTTTATGCGTTTACACTTGAGGAGCTGCAACAAGTGACATGCAGATTCACTTGGAGCAACTTACTTGGTGAAGGTGGGTTTGGAGCTGTTTACAAGGGATTTATTGATGACAAACTCAGACCTTGCTTGGAAGCTCATCCCGTAGCTGTGAAAGTGATGGATTTGGATAGTTTCCAAGGTCATAGAGAATGGCTGGCAGAAATTATTTTCCTTGGACAGCTAAGACATCCCAACCTTGTCAAGCTGATTGGATACTGTTGTGAGGAGGAGCATCGACTTCTTGTCTATGAGTACATGCCAAGAGGCAGCTTGGAGAATCAGCTCTTTAATAAGTACTATGCTGCTTTACCATGGTCAACTAGGATGAAAATTGCTTTGGGAGCAGCTAGAGGTTTAGCCTTCCTTCATGGAGCAGATAAACCTGTGATCTTCAGAGATTTTAAAACTTCCAACATCTTATTAGATTCGGACTACACAGCGAAACTCTCTGATTTTGGTCTAGCAAAGGATGCTCCCGAAGGAGAAGAAACATTAGTAGCCACACGGATAATGGGTACGCAAGGCTACGCTGCTCCTGAGTACATTATGACTGGGCATCTGACGACCAAGTGTGATGTGTACAGTTTTGGAGTTGTGCTGTTAGAACTGCTGACAGGGAAACGAGCTATACAAAAGAGCCACACGAGAAAGGAGCAGAGCCTTGTGGAATGGGCAAGGCCTCAACTGAAAGACCCAAAAAGGCTTAAACGACTTGTAGATTGTCGTCTTGAAGGCCGATATCCAACCAAAGGAGCTCAGAACATTGCTGCACTGGCTAACAAGTGCTTAAGTTACAGGCCAAAATGTAGGCCCTCTATGAAGGATGTAGTCGACTCACTGGAACTTCTACAGGACTTCTACGATGATACAGTAACAGAACCTTTTGTGTACTACGTAGCAAGAAATTAA 1137 0.4327 MTSKKIRWKPIMIILSCYRTEISLQESQEKGLKQCSFRRLSLSDACDDSRGIDDISNSFVGAKLYAFTLEELQQVTCRFTWSNLLGEGGFGAVYKGFIDDKLRPCLEAHPVAVKVMDLDSFQGHREWLAEIIFLGQLRHPNLVKLIGYCCEEEHRLLVYEYMPRGSLENQLFNKYYAALPWSTRMKIALGAARGLAFLHGADKPVIFRDFKTSNILLDSDYTAKLSDFGLAKDAPEGEETLVATRIMGTQGYAAPEYIMTGHLTTKCDVYSFGVVLLELLTGKRAIQKSHTRKEQSLVEWARPQLKDPKRLKRLVDCRLEGRYPTKGAQNIAALANKCLSYRPKCRPSMKDVVDSLELLQDFYDDTVTEPFVYYVARN* 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02437 378 Pfam Protein tyrosine and serine/threonine kinase 81 356 IPR001245 GO:0004672|GO:0006468
Pte1g02437 378 PANTHER OS01G0588500 PROTEIN-RELATED 58 360 - -
Pte1g02437 378 FunFam Serine/threonine-protein kinase BIK1 48 161 - -
Pte1g02437 378 CDD STKc_IRAK 85 359 - -
Pte1g02437 378 Gene3D Transferase(Phosphotransferase) domain 1 162 369 - -
Pte1g02437 378 ProSiteProfiles Protein kinase domain profile. 79 363 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02437 378 SUPERFAMILY Protein kinase-like (PK-like) 55 360 IPR011009 -
Pte1g02437 378 FunFam Serine/threonine-protein kinase PBS1 162 370 - -
Pte1g02437 378 ProSitePatterns Protein kinases ATP-binding region signature. 85 114 IPR017441 GO:0005524
Pte1g02437 378 Gene3D Phosphorylase Kinase; domain 1 44 161 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02437 Pte-Chr1 44974591 44976794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02437 67 370 Glycoside Hydrolase AT3G07070 49.186 1.08e-95 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pte1g02437 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02437 - - qsa:O6P43_019152 533.487