Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02436 ATGATGCACATGACATTCTACTGGGGCAAAAAGGTTACCCTTTTGATCGATTCATGGCGCACGGATTCATGGACAGATTACTCGTTGACTTTACTGGCATGCCTCGCTATCTCGGTCTTTTACCAGTACCTTGAGAATCGCCGAGTCCGCCTCAGGCTTATCTCGTCCGCTAAGCGGCCCACGGTGGCACATATCCAAACCCCTCTTCTTGAGCGGAAGCTCGCCGGAATCAACGCTAATTTGGGAGTTAAAGCCGCCGGAGCGGTTATGTTTGGGTTCAACTCTGCGATCGGGTACCTTCTTATGTTGGCTGTCATGTCCTTCAACGGTGGGGTTTTCTTGGCTGTTGTTCTGGGTCTCGCGATTGGGTACTATTTCTTTAGAAGCGGGGATGAAGAAGCTTCAGTTGTCGTTGAGAATTCCTGTGCCTGTGCCTAG 438 0.5068 MMHMTFYWGKKVTLLIDSWRTDSWTDYSLTLLACLAISVFYQYLENRRVRLRLISSAKRPTVAHIQTPLLERKLAGINANLGVKAAGAVMFGFNSAIGYLLMLAVMSFNGGVFLAVVLGLAIGYYFFRSGDEEASVVVENSCACA* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02436 145 PANTHER SOLUTE CARRIER FAMILY 31 COPPER TRANSPORTERS 1 134 IPR007274 GO:0005375|GO:0016020|GO:0035434
Pte1g02436 145 Pfam Ctr copper transporter family 4 127 IPR007274 GO:0005375|GO:0016020|GO:0035434
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02436 Pte-Chr1 44969429 44971997 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02436 1 146 Inorganic Solute Cotransporters AT5G20650 51.948 4.01e-53 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02436 K14686 - qsa:O6P43_019154 211.46
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02436 1 44969429 44971997 Pte1g00470 1 5435136 5436352 RCT
Pte1g02436 1 44969429 44971997 Pte1g02436 1 44969429 44971997 RCT