Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02424 ATGGGATATATTAATTCAGTTTTATCATCTTCAACCCAAATTCATTCTGCTGAAGATTCGCCTGTGAGTGGCGGAGGGCTCAGTCAGAATGGCAAGTTCAGCTATGGATATGCTAGCTCTCCTGGAAAAAGATCTTCAATGGAAGATTTTTATGAGACCAGGATCGATGGTATTGACGGCGAGATTGTTGGCTTGTTTGGAGTATTTGATGGTCATGGTGGTGCCCGAGCTGCAGAGTATGTCAAGCAAAACCTTTTCAGTAATTTGATTAGCCATCCCAAATTTATTTCTGATACAAAATCAGCTATAGCTGATGCATACAATCATACTGACTCTGAGTTTCTGAAGTCGGAGAATACTCAAAACAGAGATGCGGGTTCCACTGCTTCAACTGCGATTCTAGTTGGTGACCGTTTGCTTGTAGCAAATGTTGGGGACTCTCGAGCTGTTATATGCAGGGGCGGTGACGCTATTGCCGTTTCTCGAGATCACAAGCCTGACCAAACTGATGAGCGGCAACGGATTGAAGATGCTGGAGGTTTCGTCATGTGGGCAGGAACTTGGAGAGTTGGCGGGGTTCTTGCTGTTTCCCGCGCATTTGGTGATAGGCTGCTAAAGCAGTATGTTGTTGCTGATCCAGAGATACAGGAAGAAAAAATTGACAGTTCCCTTGAGTTTCTTATCCTAGCTAGTGATGGACTGTGGGATGTCGTCACAAACGAGGAAGCCGTTGCTATGATTAAACCAATCCAAGATGCAGAGGAAGGAGCCAAGAGACTGCTTCAGGAAGCATATCAGAGAGGTAGTTCTGATAACATTACTTGTGTCGTCGTCCGTTTCATGGCTAATCAAGGTGCTACCTCCCTTAGTGTTTCTGGACATAGGGAATCTCTATCCATGTAG 903 0.4507 MGYINSVLSSSTQIHSAEDSPVSGGGLSQNGKFSYGYASSPGKRSSMEDFYETRIDGIDGEIVGLFGVFDGHGGARAAEYVKQNLFSNLISHPKFISDTKSAIADAYNHTDSEFLKSENTQNRDAGSTASTAILVGDRLLVANVGDSRAVICRGGDAIAVSRDHKPDQTDERQRIEDAGGFVMWAGTWRVGGVLAVSRAFGDRLLKQYVVADPEIQEEKIDSSLEFLILASDGLWDVVTNEEAVAMIKPIQDAEEGAKRLLQEAYQRGSSDNITCVVVRFMANQGATSLSVSGHRESLSM* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02424 300 Pfam Protein phosphatase 2C 63 273 IPR001932 -
Pte1g02424 300 CDD PP2Cc 33 280 IPR001932 -
Pte1g02424 300 PANTHER PROTEIN PHOSPHATASE 27 279 IPR015655 GO:0004722|GO:0006470
Pte1g02424 300 FunFam probable protein phosphatase 2C 59 26 284 - -
Pte1g02424 300 SUPERFAMILY PP2C-like 28 280 IPR036457 -
Pte1g02424 300 ProSitePatterns PPM-type phosphatase domain signature. 65 73 IPR000222 GO:0043169
Pte1g02424 300 ProSiteProfiles PPM-type phosphatase domain profile. 34 280 IPR001932 -
Pte1g02424 300 SMART PP2C_SIG_2 45 280 IPR001932 -
Pte1g02424 300 Gene3D - 26 286 IPR036457 -
Pte1g02424 300 SMART PP2C_4 24 278 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02424 Pte-Chr1 44864266 44872020 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02424 1 284 PP2C-type Phosphatase Gene Family AT4G31750 90.493 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02424 K17506 - qsa:O6P43_015804 552.362
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02424 1 44864266 44872020 Pte1g02424 1 44864266 44872020 RCT