Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02420 ATGGTGGTGCATTTAACGGTGATGAAGGAGATCGAGGAGATGGCTTCTAGGCTCGGCGTCGATGCCTCGGCCATTGATCTCGACTCCATTCGCCTTCCTCCTAGTGATGACTTGGGCATCAAAAGTGACGATGAGGATGTTTATCAAGAGGATAATTTGGAGTTTGATACTGGGTTTGGAAATATAATAGTTGTGGATAATCTACCTGTTGTTCCTCGAGAGAAGTTTGAGAAGCTTGAAAGTGTGATCCGAAAGATCTATAGCCAGATTGGCGTTGTTATAGAAGATGGCCTTTGGATGCCTGTTGATCCTGAAACAGAGAAAGCATTGGCTAAGCTTGCAAAACAGAAAACACATGGATACAAGTTGGGCCGTTTCCATATTTTTGCTGTCAGCATGTTTGATGATTTTGATAGGTTCATGAAAGTCCCTGATAAATGGGCTCCTCCTGAAAGCAAGCCATATGTTCCAGTGGAAAATTTACAACATTGGTTGACTGATCCTAAAGCTCGTGACCAATTTGTAATTCGCGCCGCTTCAGATACTGAAGTAATGTGGAATGATGCTAGGCAAATGAAGGCTGACCCTGTTTACAAGCGTCCTTTTTGGACAGAAAGTTTTGTGCAATGGTCCCCATTGGGCACATTTTTGGCGACAATTCATAGACAGCGAGCAGCTGTGTGGGGTGGTGCTATGGAGTTCAGTCGTTTGATGCGATTTGCTCATGCTCAGGTTAAACTCATTGATTTCTCTCCTGGTGAGAAGTACCTTGTGACCTATAGCAGCCATGAACCAAGTAATCCTCGAGATGCAAATAAGGTTGTGATTAACGTATTTGACATAAGAACTGGAAAAGTGATGCGTGATTTCGAGGGAAGTGCTGATGATTTTGCAATTGGAGGCACTGGTAGTGTCACTGTGTCATGGCCAATTTTCAGGTAG 942 0.4374 MVVHLTVMKEIEEMASRLGVDASAIDLDSIRLPPSDDLGIKSDDEDVYQEDNLEFDTGFGNIIVVDNLPVVPREKFEKLESVIRKIYSQIGVVIEDGLWMPVDPETEKALAKLAKQKTHGYKLGRFHIFAVSMFDDFDRFMKVPDKWAPPESKPYVPVENLQHWLTDPKARDQFVIRAASDTEVMWNDARQMKADPVYKRPFWTESFVQWSPLGTFLATIHRQRAAVWGGAMEFSRLMRFAHAQVKLIDFSPGEKYLVTYSSHEPSNPRDANKVVINVFDIRTGKVMRDFEGSADDFAIGGTGSVTVSWPIFR* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02420 313 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 EIF3 -RELATED 30 313 IPR011400 GO:0003723|GO:0003743|GO:0005852|GO:0006413|GO:0031369
Pte1g02420 313 SUPERFAMILY DPP6 N-terminal domain-like 206 293 - -
Pte1g02420 313 Gene3D - 99 309 IPR015943 GO:0005515
Pte1g02420 313 FunFam Eukaryotic translation initiation factor 3 subunit B 56 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02420 Pte-Chr1 44850504 44852143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02420 10 313 Eukaryotic Initiation Factors Gene Family AT5G27640 65.300 1.48e-154 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02420 K03253 - gmx:100817394 528.48