Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02410 ATGGCGGAACAGACGGAGAAGGCATTTTTGAAGCAGCCCAAGGTGTTTCTTAGCTCGAAGAAATCTGGAAAAGGTAAAAGGCCCGGAAAAGGAGGGAACAGGTACTGGAAATCCATCGGATTGGGTTTTAAGACACCCAGAGATGCCATTGAAGGAACTTATATTGATAAAAAATGCCCGTTTACTGGAACTATTTCCATCAGAGGTCGTATTCTTGCTGGTACTTGCCACAGTGCTAAGATGGTTCGGACAATTATTGTGCGCAGGAATTATCTCCACTATATCAAGAAATACCAAAGGCAAGCCTCTCTTTTGCTATTCAAGAGGCATTCAAACATAGCAGCTCATATCTCTCCTTGTTTTCGTGTGAAGGAGGGTGACTATGTCATTATTGGACAGTGCAGACCATTGTCAAAGACCGTGAGGTTTAATGTCTTGAAAGTGATTCCAGCTGGATCTTCCGCTCTTGGCAAGAAGGCTTTTACAGGAATGTGA 495 0.4343 MAEQTEKAFLKQPKVFLSSKKSGKGKRPGKGGNRYWKSIGLGFKTPRDAIEGTYIDKKCPFTGTISIRGRILAGTCHSAKMVRTIIVRRNYLHYIKKYQRQASLLLFKRHSNIAAHISPCFRVKEGDYVIIGQCRPLSKTVRFNVLKVIPAGSSALGKKAFTGM* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02410 164 FunFam 40S ribosomal protein S11 1 163 - -
Pte1g02410 164 Pfam Ribosomal_S17 N-terminal 4 72 IPR032440 -
Pte1g02410 164 PANTHER 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER 10 155 IPR000266 GO:0003735|GO:0005840|GO:0006412
Pte1g02410 164 Gene3D - 1 163 - -
Pte1g02410 164 SUPERFAMILY Nucleic acid-binding proteins 68 152 IPR012340 -
Pte1g02410 164 ProSitePatterns Ribosomal protein S17 signature. 126 138 IPR019979 GO:0003735|GO:0005840|GO:0006412
Pte1g02410 164 Pfam Ribosomal protein S17 74 147 IPR000266 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02410 Pte-Chr1 44731231 44732569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02410 1 165 Cytoplasmic Ribosomal Protein Gene Family AT5G23740 85.455 2.03e-93 266
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02410 K02949 - qsa:O6P43_014608 288.885