Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02405 ATGGCGTATCATAATCATCCCCACCTCTCTCAGGACCTTCCACTTCCTCGCTTTTCGGATCAACATCAGCAGAGTACTCAGCCTCCTGCACACACTGACACCAACCTCAGCACCATCTTAGACTCTTCATCTGAACCGACCTCTTCCAAACCAGAATCCGATCCTCACCGCCGCCACCCACTTCAGACCGCACCCAATTGGCTAAATAACGTTCTCTTTCCTGCTCAATACGGTGATATCAACAACCAAAACGGCTCCCGTCATAACAATACCAGCAGCGACGGTGCCACCAACAGCAATAACAACGGTAATCATTTTCTCAACCTCCACACCGCCGCCTCGAATTCCACGGATGCTGCTACCCAAACGTCAAACCAATGGCTCTCTCGCCCGATCATACACCGTAATAAAAGTGAAGTCATCGACGATGTCATGGCGGGTGTTGCCTTGTCCCAGGACTCCACCGACTTGAACGCAGCTGGCAACGCCCTCCACAGCAAGGTCGACGCGGTGGTTCAAGAGAGCAGCGGAGGTCGAGGAGGAGATGCTGGGTTGGTGAACTGGCAGAATGCTGGCTACAAAGCGGAGATTCTAGCGCACCCTCTTTACGAACAGCTGTTGTCGTCACACGTGGCGTGCCTCCGAATTGCCACCCCTGTTGATCAGTTGCCGAGAATTGATGTTCAACTGGCGCAGTCGCAGAATGCGGTGGCTAAGTACTCGAACTTAGTACATGCCGGCCAGACCATAGTTGGCGATGCTAAGGACCTCGACCAGTTCATGGTGTGCTAA 792 0.5316 MAYHNHPHLSQDLPLPRFSDQHQQSTQPPAHTDTNLSTILDSSSEPTSSKPESDPHRRHPLQTAPNWLNNVLFPAQYGDINNQNGSRHNNTSSDGATNSNNNGNHFLNLHTAASNSTDAATQTSNQWLSRPIIHRNKSEVIDDVMAGVALSQDSTDLNAAGNALHSKVDAVVQESSGGRGGDAGLVNWQNAGYKAEILAHPLYEQLLSSHVACLRIATPVDQLPRIDVQLAQSQNAVAKYSNLVHAGQTIVGDAKDLDQFMVC* 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02405 263 MobiDBLite consensus disorder prediction 16 49 - -
Pte1g02405 263 SMART KNOX1_2 191 235 IPR005540 GO:0003677|GO:0005634
Pte1g02405 263 Pfam KNOX1 domain 193 233 IPR005540 GO:0003677|GO:0005634
Pte1g02405 263 MobiDBLite consensus disorder prediction 1 62 - -
Pte1g02405 263 MobiDBLite consensus disorder prediction 78 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02405 Pte-Chr1 44715534 44716325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02405 1 261 Homeobox Transcription Factor Family AT5G25220 42.143 2.61e-41 145
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02405 - - qsa:O6P43_015734 305.834