Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02402 ATGGCCAGGCCACAACAGCGATATCGAGGCGTTCGACAAAGGCATTGGGGATCTTGGGTCTCCGAAATTCGTCATCCGTTGTTGAAGACTCGAATTTGGTTGGGCACTTTTGAAACGGCGGAAGATGCAGCTCGAGCATATGATGAAGCAGCAAGGTTAATGTGTGGTCCGAGGGCAAGAACCAATTTCCCTTACATTCCCAATGCATCACAGTCATCATCTTCGAAGCTTCTCTCGGCTACTTTGACAGCTAAACTTCATAGGTGCTACATGGCTTCCCTGCAAATGACAAAGCCAACACAAGAGCCTCAAAAAGTAACATCACCAAGTTATATGTCCACAAGCACCATTACTGTCGAGAGAACCATCGAACAAGATAAACGATTGCTAGAGAAAAAAACAATGGCAGAGCAAGAAGCAGAGTCCAACTGGGTTGTCAAGAAAGTTCAAATGGAAAGTACCCCACAGTTTAAGATTCTCGAGGAAGACCATATAGAGCAAATGATAGAGGAGCTGCTTGACTATGGCTCCATTGAACTTTTTCCTGCCATGCAACCTCAAGCCATGTGA 570 0.4544 MARPQQRYRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPYIPNASQSSSSKLLSATLTAKLHRCYMASLQMTKPTQEPQKVTSPSYMSTSTITVERTIEQDKRLLEKKTMAEQEAESNWVVKKVQMESTPQFKILEEDHIEQMIEELLDYGSIELFPAMQPQAM* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02402 189 Gene3D AP2/ERF domain 6 65 IPR036955 GO:0003700|GO:0006355
Pte1g02402 189 ProSiteProfiles AP2/ERF domain profile. 7 64 IPR001471 GO:0003700|GO:0006355
Pte1g02402 189 SUPERFAMILY DNA-binding domain 7 65 IPR016177 GO:0003677
Pte1g02402 189 CDD AP2 6 65 IPR001471 GO:0003700|GO:0006355
Pte1g02402 189 FunFam Ethylene-responsive transcription factor 2 6 65 - -
Pte1g02402 189 PRINTS Ethylene responsive element binding protein signature 8 19 IPR001471 GO:0003700|GO:0006355
Pte1g02402 189 PRINTS Ethylene responsive element binding protein signature 30 46 IPR001471 GO:0003700|GO:0006355
Pte1g02402 189 Pfam AP2 domain 7 56 IPR001471 GO:0003700|GO:0006355
Pte1g02402 189 PANTHER SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR 6 124 - -
Pte1g02402 189 SMART rav1_2 7 70 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02402 Pte-Chr1 44685783 44687093 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02402 1 190 AP2-EREBP Transcription Factor Family AT5G25190 65.263 5.91e-76 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pte1g02402 AP2 7.9e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02402 - - qsa:O6P43_019253 265.774