Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02395 ATGGCTGGAAGTGGAGCTTTTGCAGAAATCGTAGATGGTGATGTTTACAAATACTATTCAGATGGCCAGTGGAAAAAGTCTTCCTCAGGAAAATCAGTCCCCATCATCAATCCCACTACCAGGAAAGTCCATTTCAAGGTTCAAGCTTGTAGCCAGGAGGAGGTGAATAGAGTCATAGAATCAGCCAAGGCAGCACAAAAGCTATGGGCCAAGACACCTTTGTGGAAAAGAGCAGAGTTGCTTCACAAGGCCGCAGCAATATTGAAAGAGCATAAAGTACCCATTGCAGAATGCCTGGTCAAGGAGATAGCTAAGCCAGCTAAAGATGCCGTCACTGAGGTTGTTAGATCAGGTGATCTCGTATCGTATTGTGCTGAAGAAGGAGTGAGAATTCTCGGAGAGGGGAAGTTTCTTGTGTCTGATAGCTTTCCAGGAAATGAGAGGACCAAATATTGTCTTACTTCAAAGATTCCACTTGGAGTTGTCTTAGCTATTCCACCTTTTAATTATCCTGTCAATCTGGCTGTTTCAAAGATCGCTCCTGCTCTTATTGCTGGAAATTCCCTTGTGCTCAAGCCCCCAACTCAGGGAGCTGTAGCAGCACTTCACATGGTGCATTGCTTTCATTTAGCGGGTTTCCCTAAAGGTCTTATTAGCTGTGCCACAGGAAAGGGCTCTGAGATTGGAGACTTCCTTACAATGCATCCTGGAGTCAGTTGCATTAGCTTCACAGGTGGAGACACGGGGATAGCAATCTCAAAGAAGGCTGGAATGGTTCCGCTTCAAATGGAATTGGGAGGCAAAGATGCATGCATTATTCTCGAAGATGCTGATCTTGATTTAGCTGCTGCGAACATTGTAAAAGGAGGCTTTTCTTACAGTGGTCAAAGATGTACTGCAGTAAAGGTAGTGTTGGCTATGGAGTCAGTTGCTGACACACTTGTCCAGAAAGTTAATTCTAAAGTGACCAAATTAACTGTGGGTCCACCGGAAGATGACTGTGATATCACTCCAGTTGTTACAGAGTCCTCTGCTAATTTTATTGAAGGACTGGTAATGGATGCCAAGGAAAAAGGAGCCATGTTATGTCAGGAGTACAAGAGGGAGGGAAACCTCATATGGCCATTGTTGTTAGATAATGTTCGCCCAGATATGAGAATAGCATGGGAAGAGCCATTTGGTCCAGTATTGCCTGTGATCAGGATCAATTCTGTAGAAGAAGGAATCCACCATTGTAATGCAAGTAATTTTGGCCTTCAGGGTTGTATTTTCACAAAAGACATTAATAAGGCAATTTTGATAAGCGATGCCATGGAAACAGGAACAGTCCAAATTAACTCAGCACCTGCTCGTGGACCAGATCATTTTCCTTTTCAGGTTGGTGTTTCCACAATATTTCTACTTTTTATTTATCTCATGACCCCTTTCATTTCAGATATCTTACTTTATCCCACTGCTCTTCTTTCAGGGTCTGAAAGACAGTGGAATTGGTTCGCAAGGAATCACTAA 1509 0.4327 MAGSGAFAEIVDGDVYKYYSDGQWKKSSSGKSVPIINPTTRKVHFKVQACSQEEVNRVIESAKAAQKLWAKTPLWKRAELLHKAAAILKEHKVPIAECLVKEIAKPAKDAVTEVVRSGDLVSYCAEEGVRILGEGKFLVSDSFPGNERTKYCLTSKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNSLVLKPPTQGAVAALHMVHCFHLAGFPKGLISCATGKGSEIGDFLTMHPGVSCISFTGGDTGIAISKKAGMVPLQMELGGKDACIILEDADLDLAAANIVKGGFSYSGQRCTAVKVVLAMESVADTLVQKVNSKVTKLTVGPPEDDCDITPVVTESSANFIEGLVMDAKEKGAMLCQEYKREGNLIWPLLLDNVRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCIFTKDINKAILISDAMETGTVQINSAPARGPDHFPFQVGVSTIFLLFIYLMTPFISDILLYPTALLSGSERQWNWFARNH* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02395 502 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 267 457 - -
Pte1g02395 502 Pfam Aldehyde dehydrogenase family 24 458 IPR015590 GO:0016491
Pte1g02395 502 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 263 270 IPR029510 GO:0016491
Pte1g02395 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 268 457 IPR016163 GO:0016620
Pte1g02395 502 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 291 302 IPR016160 GO:0016491
Pte1g02395 502 CDD ALDH_F11_NP-GAPDH 15 459 - -
Pte1g02395 502 FunFam NADP-dependent glyceraldehyde-3-phosphate dehydrogenase 22 281 - -
Pte1g02395 502 PANTHER ALDEHYDE DEHYDROGENASE 3 459 - -
Pte1g02395 502 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 265 IPR016162 GO:0016491
Pte1g02395 502 SUPERFAMILY ALDH-like 16 458 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02395 Pte-Chr1 44619482 44624198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02395 1 459 Aldehyde Dehydrogenase Gene Family AT2G24270 87.582 0.0 852
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02395 K00131 - jre:109005232 866.685