Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02393 ATGGAAGAGGAGAAGCATACTCTGTTCGGCAATTACGAGAAAGGCAGACTGTTGGGGAAGGGAACTTTCGCCAGAGTCTACTACGGCAAACATGTTGTTACAGGCCAGAGTGTGGCCATCAAAGTCATAAGCAAAGACCAAGTCAAGAAAGAAGGCATGATGGAGCAGATCAAGCGGGAGATATCTGTCATGCGCTTGGTTCGCCACCCCAACATAGTCGAGCTCAAAGAAGTCATGGCAACTAAGACCAAAATTTTCTTCATCATGGAATATGTGCGTGGCGGCGAACTCTTCACCAAGGTTGCAAAAGGCAAACTCAAAGAGGATCTCGCTCGGAAGTACTTCCAACAGTTAATCAGTGCTGTGGATTTCTGTCACAGTAGAGGAGTATCGCATAGGGATCTCAAACCTGAAAATTTACTCCTCGATGAGAATGAAGACCTCAAAGTCTCTGACTTTGGTTTCTCAGCTTTGCCTGAGCAACTACAAAATGATGGGCTCCTTCACACCCAGTGTGGAACTCCAGCTTATGTGGCCCCTGAAGTGTTGAGAAAAAGAGGGTACGATGGATCCAAGGCTGATATTTGGTCTTGTGGCGTGATTCTCTATGCCCTGCTTGCTGGGTTTCTACCTTTTCAAGATGAAAACCTCATGACTATGTACAGAAAGGTTTTGAGAGGTGATTACGAATTTCCGCCATGGTTTTCAACAGAATCAAGGAGATTGATCTCCAAGCTCCTTGTGGTTGACCCAGACAGACGCATCTCTATTCCTGCAATAATGCGTGTCCCTTGGTTTAGGAAGGAGTTCAAAGCGCCACTCACTTTTTGTGGAGAAGAAGCCCCCATTTCAGAAGCAGACCTGCAGCCGCTTGGCTCAGAACTGAAGGAGTCCTCAAATCGGAAGCAGCCCAAGTTTTTCAATGCCTTTGAGTTCATTTCTTCTATGTCTTCTGGATTCGATCTGTCCGGTTTGTTCGATAACAAGAAAGCAGGATCCATGTTCACTTCCATGTGTTCTGCCACCACAATCATGTCAAAAATCGAGACGGCAGCAAAGGGTTTAGGTTTCAAAGTAGCGAGTGCTAAGGACTTCAAGATTAGGCTACAAGGGCCAATGGGAGGGAGGAAGGGGAGACTGTCGGTCACCGCGGAGGTGTTCGAGGTGGCACCGGAGGTCGCCATCGTTGAATTCTGCAAATCCTCTGGCGACACTTTCGAATATGCCAAATTTTGCGCAGATGGCGTTCGACCAGCGTTGAAAGACATTGTTTGGACATGGCAAGGTGACAGTTTGTGTAACGATAACGCGAACGGCAGTAACGGTGAAGCACGTGAGAATGTAGTAAACAGTTAG 1356 0.4712 MEEEKHTLFGNYEKGRLLGKGTFARVYYGKHVVTGQSVAIKVISKDQVKKEGMMEQIKREISVMRLVRHPNIVELKEVMATKTKIFFIMEYVRGGELFTKVAKGKLKEDLARKYFQQLISAVDFCHSRGVSHRDLKPENLLLDENEDLKVSDFGFSALPEQLQNDGLLHTQCGTPAYVAPEVLRKRGYDGSKADIWSCGVILYALLAGFLPFQDENLMTMYRKVLRGDYEFPPWFSTESRRLISKLLVVDPDRRISIPAIMRVPWFRKEFKAPLTFCGEEAPISEADLQPLGSELKESSNRKQPKFFNAFEFISSMSSGFDLSGLFDNKKAGSMFTSMCSATTIMSKIETAAKGLGFKVASAKDFKIRLQGPMGGRKGRLSVTAEVFEVAPEVAIVEFCKSSGDTFEYAKFCADGVRPALKDIVWTWQGDSLCNDNANGSNGEARENVVNS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02393 451 CDD STKc_SnRK3 12 265 - -
Pte1g02393 451 Gene3D Transferase(Phosphotransferase) domain 1 92 273 - -
Pte1g02393 451 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02393 451 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Pte1g02393 451 FunFam Non-specific serine/threonine protein kinase 5 305 - -
Pte1g02393 451 Gene3D Kinase associated domain 1, KA1 301 426 - -
Pte1g02393 451 ProSiteProfiles NAF domain profile. 302 327 IPR018451 GO:0007165
Pte1g02393 451 Pfam NAF domain 304 360 IPR004041 GO:0007165
Pte1g02393 451 SUPERFAMILY Protein kinase-like (PK-like) 8 314 IPR011009 -
Pte1g02393 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 5 421 - -
Pte1g02393 451 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pte1g02393 451 FunFam Non-specific serine/threonine protein kinase 302 425 - -
Pte1g02393 451 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
Pte1g02393 451 Gene3D Phosphorylase Kinase; domain 1 2 91 - -
Pte1g02393 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Pte1g02393 451 CDD CIPK_C 308 421 - -
Pte1g02393 451 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02393 Pte-Chr1 44606249 44608225 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02393 1 441 CBL-interacting serine-threonine protein kinases AT5G10930 69.799 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pte1g02393 Pkinase 1.4e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02393 - - tcc:18587713 684.871