Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02392 ATGGACTTGAAATGGGTTGATACTTCTCTCAACCTCCATGTCCGTCCTTCGGATTCAACAAATAAGGTCATAGATGAAAACATACAGAAAGGAGAGTGTAGCGGTGGCTGTGCCAAACCTGAAGGGCAAGTAAAAGATTTAGCGGCTGCAGACGATGTTAATTTGGTTCAAGAGATGGAGAGGATAACATCAGAGAATAAGAAACTAACGGAGATGCTAGCTGCGCTGAGTGAGAAGTACAATGCGCTGCATAACCATTTGAGGGACATGACGAATAAGAATTCTGAAAAAGAAACTACACAGTCAAGGAAGAGAAAGGCCGACAATGAGTTTGACCAAGGAATTGACATGTTTGGAGTTAATATTGGTACACCTGAGTGCAGCTCTAGTGAAGAAGAACCATGCAAAAGGCCGAAGGAAGATGATAGCAGAAAGGTTTTAAGGGTTCTTGTAAGAACAGATCCATCTGATACTACCCAATACGTTAAGGATGGATACCATTGGAGAAAATATGGTCAGAAGGTCACCAGAGATAACCCTTCTCCTAGGGCTTATTTTAAGTGTTCCTATGCTCCAAACTGCCCTGTGAAAAAGAAGGTGCAGAGAAGTTTAGGAGACCAGTCCATCTTGGTAGCAACTTACGAAGGAGAACACAACCACGCAAGACCTGATCAAACTGAATTGCCAAAAGGCTCAGTATTCCATGCTATAGACCTTGGCATTCCTCATGCTATTTCATCCATAAGTCCAGCAGGTCCTACTGTTCTATTCCAGACAGCAAGGATGGTTGACGAGAGAGAATCAATGTTCAACAAGGAATTAGCTCCAGAATTGCGGCGGTTTTTGGTTCAAGAGATGGCGACTTCATTGACAAAGGATCCCAATTTCACAGCAGTACTTGCAGCTGCCATTTCAGGGAGAATATTGGACGAGACTCGATCATAG 945 0.4328 MDLKWVDTSLNLHVRPSDSTNKVIDENIQKGECSGGCAKPEGQVKDLAAADDVNLVQEMERITSENKKLTEMLAALSEKYNALHNHLRDMTNKNSEKETTQSRKRKADNEFDQGIDMFGVNIGTPECSSSEEEPCKRPKEDDSRKVLRVLVRTDPSDTTQYVKDGYHWRKYGQKVTRDNPSPRAYFKCSYAPNCPVKKKVQRSLGDQSILVATYEGEHNHARPDQTELPKGSVFHAIDLGIPHAISSISPAGPTVLFQTARMVDERESMFNKELAPELRRFLVQEMATSLTKDPNFTAVLAAAISGRILDETRS* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02392 314 SMART WRKY_cls 162 222 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02392 314 MobiDBLite consensus disorder prediction 86 109 - -
Pte1g02392 314 Pfam WRKY DNA -binding domain 163 220 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02392 314 ProSiteProfiles WRKY domain profile. 157 223 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pte1g02392 314 SUPERFAMILY WRKY DNA-binding domain 158 223 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02392 314 Gene3D WRKY domain 148 224 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pte1g02392 314 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 52 308 IPR044810 GO:0003700
Pte1g02392 314 Coils Coil 59 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02392 Pte-Chr1 44603191 44605131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02392 55 311 WRKY Transcription Factor Family AT1G80840 45.620 1.23e-69 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pte1g02392 WRKY 3.5e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02392 - - vvi:100264507 280.796