Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02382 ATGGATAGCTCTCTATCTCCTAAAGGAAAAGGGATTGACTACTGGGGATCTACTGTACCTCAGCACGATGCTTCCACACAATTTGATGCAGAAGCAGGGACTTACTTCTCGGATGACATAGTGAACAGCATTTCAGAGCTTATGAACTTTGATTCATATGCTGGTTGGTGCAGTGGCGCACCAACTACAGATTATATTTTGGGCAATGGGATGTCAACATACCCGTTGCCATTGGTACCCTATGCATCTTCTGATGTTTTTAACATAGCATATCAAAGTGGTGGAGCACTCCCTGTAATTGAAGGCAGTGGAAATTATGACACTGAAGGAAGTTCAATCAATTTTCACAAAATGAATGCACAACGAAAGTTTCCAAGCGATGGGGATAAATTGGATATAAAACACAATGGCAATACTTTTCAAAAAAATGGTATTTTAAACACAGGAGTTGGTATAATCTCCCGATCACTTGGCTCATCACTTGATGAGAGAATGCTGAGAGCTTTGTCACTGTTTAAAGAGTCAGCTGTTGGTGGCATTTTGGCTCAAGTTTGGGTACCTATGAAGCATGGAGATCAGAGCATCTTAACCACAACTGAGCAACCTTATTTGCTAGATCAGATGCTTGCTGGATATCGTGAGGTGTCAAGGACATTTACATTCTCTACAGAAGGAAAACCTGGTTCTTTCCCGGGTCTTCCTGGTCGGGTTTTTATTTCCAGAACTCCTGAGTGGACTTCAGATATTGGCTACTACAACAAGGCTGAGTATTTGAGGGTGGAGCATGCTATCAATCATGAAGTTCATGGATCTATTGCCATCCCCATTTTTGATATTTATCACGAAGTAACATGCTGTGCTGTTCTCGAACTTGTAACCACTAAGCAGAAACCGAATTTCGATGGGGAGTTGGAATTAGTATGCCAGGCCTTGCAGACTGTGAATCTCCGGACAACTGCACCTCCGCGACTTCTTCCTCAGAGTCTGTCAAACAATCAAAAAGCAGCATTGGCAGAAATCACTAATGTCTCAAGAGCTGTGTGTCATGCACATAGATTGCCATTGGCACTGACATGGATTCCTTGTTACTACAATGAGGGATCTGGTGATGAGATCATGAAAGTGCAAATCAGTGGGGGTCAAACAAGTACAAGTGAGGAATCTGTTCTCTGTATTGAAGAATCTGCTTGTTATGTGAACGACAAAGCAGTGGAAGGATTTATCCATGTATGTAAAGGACACCATCTTACAGAAGGACAAGGTATAGCTGGAAAAGCGCTTCAGTCAAATCATCCTTTCTTCTATCCAGATGTGAAGACATATGACATAAGTGAATATCCACTAGTCCATCATGCACGCAAGTATGGCTTGAATGCTGCTGTTGCAATCAGACTAAGGAGTACTTTCACCAATAACGACGATTACGTATTGGAATTCTTTCTGCCTGTCAATATAACATCAAGTTCACAACAGAAACTTCTATTAGACAACCTCTCCTGTTCCATGCAGAGAGTTTGTACGAGTTTAAGGACAGTTTCAGATGCTGAATTAGCTGGCATAGGAGGAGAAAAATGGGAGTTCCAGAATGGAGAGAACTCTCAATTCATGGCTCTATCTGCAGGAAATTGTCAGGTCAAATCCTCTGATGGCAACCATGCTGCAACTTCAGAAATACCCTTGAATGTATCTAGTGTGAAAAAAGATAGGATTGAAGCTGAATGCTTGTCTGACCAGGCAATTAGTGGAGGAAAAAGGCAGGTGGGAAAAAGAATAAGTCCAACTGAGAAGACCGTCAGTTTAAGTGTTCTCCAGCAATATTTTCCCGGTAGTCTAAAGGATGCTGCAAAGAGCATTGGTGTTTGTCCCACAACACTAAAACGTATATGCAGACAACATGGCATTTCCAGGTGGCCCTCCCGTACTATAAACAAAGTGAACCGATCATTGAAGAAAATACAGACAGTGTTGGATGCTGTGGAGGGAGTTGAGGGAGGGTTGAAGTTTGATCCTGTCACTGGAGGCTTTGTGGCTGCACGAGCAATCATTCAAGATGCACGGAAGAATCTTTCACTTCATGACGCTGTTCTTCCTGCCCAAAACTCACAGCCTCTCTCTAGTGATGCAGTTATCGCACCTCTAGCATGTGGCAGTTGTAAACACATTGCCATTAAGTTGGAAGGGGATAGTTTTTATATGGAAAGCAAGCTCATTAAGCGATCAGCGACTGAGCTCAGCCCAAACACTTATAATGTTTCTGCCGCCGATTGTAATGAGGATTCAAAATCAATGGATGTGGATGATGGACAAGACAAGCAAGCTAGTCCTCTCACAAATCCTCCATCTTGTCGTTCAGACACCTCCCTGGAGTTTTGTTTTGCAAAAGGTGAAATATGCGGTATGGACAATGGTGCTCTGAAATTATACAATTCCGACAGCCACGTTGTGTCTCAGAGTTCAAGCTCTTTGGTTGCTGCAGAAGAAATGAATATAGGCTTGGATAGGGATGATCATAATAGTGAGAATGACCAGCCAACCATGTCAAATGTGTCAGACTCGTCAAATGAATTGGATTCAGTACTCCACGGCAGTGCTTCAAGCTCTCAGAGTGTCGAGGAAAGGAACCCTTCAAGTTCAAAGCTTGATTCACACGTTGCTGACTTGGGGTCAAAAATTATAGTGAAAGCAACCTACAAAGACGACACAATACGCTTCAAGTTCGAGCCCTCTGCTGGTTGTTTCCAACTGTATGACCAAGTTGCTAAGAGATTCAAGTTACGAACTGGTACATTTCAGCTCAAATACTTGGATGACGAAGAGGATTGGGTTATGCTCGTGGATGACTCAGATTTCCAAGAATGTTTAGACACAATGGATGATGTCGGCACACACACAGTGAAATTCCTCGTCCGAGACATTCCATGTGTCCTGAGCAGTTCTGGCAGTAGCAGCTGCTTTATTGCAGGTACATAG 2970 0.429 MDSSLSPKGKGIDYWGSTVPQHDASTQFDAEAGTYFSDDIVNSISELMNFDSYAGWCSGAPTTDYILGNGMSTYPLPLVPYASSDVFNIAYQSGGALPVIEGSGNYDTEGSSINFHKMNAQRKFPSDGDKLDIKHNGNTFQKNGILNTGVGIISRSLGSSLDERMLRALSLFKESAVGGILAQVWVPMKHGDQSILTTTEQPYLLDQMLAGYREVSRTFTFSTEGKPGSFPGLPGRVFISRTPEWTSDIGYYNKAEYLRVEHAINHEVHGSIAIPIFDIYHEVTCCAVLELVTTKQKPNFDGELELVCQALQTVNLRTTAPPRLLPQSLSNNQKAALAEITNVSRAVCHAHRLPLALTWIPCYYNEGSGDEIMKVQISGGQTSTSEESVLCIEESACYVNDKAVEGFIHVCKGHHLTEGQGIAGKALQSNHPFFYPDVKTYDISEYPLVHHARKYGLNAAVAIRLRSTFTNNDDYVLEFFLPVNITSSSQQKLLLDNLSCSMQRVCTSLRTVSDAELAGIGGEKWEFQNGENSQFMALSAGNCQVKSSDGNHAATSEIPLNVSSVKKDRIEAECLSDQAISGGKRQVGKRISPTEKTVSLSVLQQYFPGSLKDAAKSIGVCPTTLKRICRQHGISRWPSRTINKVNRSLKKIQTVLDAVEGVEGGLKFDPVTGGFVAARAIIQDARKNLSLHDAVLPAQNSQPLSSDAVIAPLACGSCKHIAIKLEGDSFYMESKLIKRSATELSPNTYNVSAADCNEDSKSMDVDDGQDKQASPLTNPPSCRSDTSLEFCFAKGEICGMDNGALKLYNSDSHVVSQSSSSLVAAEEMNIGLDRDDHNSENDQPTMSNVSDSSNELDSVLHGSASSSQSVEERNPSSSKLDSHVADLGSKIIVKATYKDDTIRFKFEPSAGCFQLYDQVAKRFKLRTGTFQLKYLDDEEDWVMLVDDSDFQECLDTMDDVGTHTVKFLVRDIPCVLSSSGSSSCFIAGT* 990
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02382 989 CDD PB1_NLP 891 971 IPR034891 -
Pte1g02382 989 MobiDBLite consensus disorder prediction 842 882 - -
Pte1g02382 989 ProSiteProfiles PB1 domain profile. 890 972 IPR000270 GO:0005515
Pte1g02382 989 MobiDBLite consensus disorder prediction 753 783 - -
Pte1g02382 989 ProSiteProfiles RWP-RK domain profile. 578 665 IPR003035 -
Pte1g02382 989 SUPERFAMILY CAD & PB1 domains 886 974 - -
Pte1g02382 989 SMART PB1_new 890 972 IPR000270 GO:0005515
Pte1g02382 989 Pfam RWP-RK domain 597 645 IPR003035 -
Pte1g02382 989 Pfam PB1 domain 893 971 IPR000270 GO:0005515
Pte1g02382 989 MobiDBLite consensus disorder prediction 833 882 - -
Pte1g02382 989 Gene3D - 886 971 - -
Pte1g02382 989 PANTHER PROTEIN NLP8 136 983 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02382 Pte-Chr1 44533336 44539216 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02382 42 990 NLP Transcription Factor Family AT3G59580 47.083 0.0 753
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF RWP-RK Pte1g02382 PB1 2.9e-16 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02382 - - qsa:O6P43_000048 1113.98