Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02358 ATGTCACAGCCTAGTGAAGAGAAGATACCTCTATTAAGGGATGGGATATTGCATTCTCTTGGAACAAGGAGGAACACTAGAGGAGAGCTCAGAAGATTCATTCTTTCGCCCTATCATCGCCGGTACAGGATCTGGGATACTTTTCTGAATGTTCTGGCGATCTATACTGCTTGGGTATCGCCCTTTGAATTCGGGTTTCTACAAGAACCAACAAGACCACTCTCGATTACTGATAATATGGTGAATGGAATCTTCGCTGTGGATATTTTTCTCACATTCTTTGTAGCTTACCTTGATAAAGCTACGAACCTACTCGTTGATGATCCGAAGATGATTGCCCGGAACTATGCAATTTGGTTCTTAATTGATGCCATAAACTCCATTCCTCTAGAGCTTGCAATGAAGATTGCTCCTTCGAAGCTCCGCCCATATGTATCATTGATCAATATGTTTCGTCTTTTTCGTCTTCGAAGAGTTTGTGCGTTGTTTTCTAGACTGGAGGAGGACATGAACTACAACTATTTCTCTGTTCGATTTGCTAAGCTTGTCTGTGTTACCCTTTTCACGGTTCACTTGTTTGCCTGCTGCTATCACTTATTTGGTGATGCACAGTGTCTTGACGAGAGTTTGTGGATTTCTTATGTGACTTCCATTTATTGGTCTACAACTACCCTAACAACCGTTGGCTATGGAGATCTACACCCAGAGAATACTGGTGAGATGATTTTTGACATCTTCTACATGCTTTTCAATATGGCGTTGGATGCATATTTGATTGGTAATATGACAAACTTGGTTGTTCGTTGGACCAGCAGAACAAGGAGATTTAGGGACACCATACAAGCGGCATCCAAGTTTGCTGAGAGGAATGGATTGTCTGGTATTTTGCGAGACCAGATGCAGGAGCATATATGTTTAAAATTCAAAATAGACTCGGAGGGACTGCAGCAACAAGAGACTCTTGACTCTCTTCCGAAGGACATCCGATCAAGAATTTCACATCATCTATTTAAGGATCAAGTTAAGAATGCGTACTTATTTCGTGAGGTTTCCAAGGACTTGCTTTCGCAGTTGGTCTCTGAGATCAAAGCTGAGTACTTTCTTCCTGGAGAAGTTGTCATCTGGCAACATGAAGTTCCTACACATTTTTATATACTGGCCTCCGGTGCTGCGGATTTTCTTGTTCAGACAGAAACGGAGTTGCCTGATCCGGAACAAACGGAGTTGCCTGTTCGGGAACAAACGGATTTGCTTGTTAATGAAAATCATTTAAAAAAACTGGACACTCTGAATGATATTTTGGTGAAGACAGAGAACATTCTAGAACGTGGCAGGATGGAGATACCCCTAACTCTATGCTTTGCCGTAGGCAGAGGACATGAGTTCTTGCTACGTCAGTTGTTGAAGAAGGGCTTATACCCAAATGAATCAGATAACAAAGGACGGACAGCTTTGCATATGGCAGCATCGAAAGGGAGCAAAAACTGCGTTAAACTTCTTTTGCATTATGGCGCCGATCCAAACATTAAAGATACAGAAGGACATGTGCCATTATGGGAGGCTCTAGTAGCTGGTCATGAATCAGTAACTAGAATATTAGCAGATGGAGGTGCCATGTTAGAGAATGGAGATTCTGGTCACTTTGCATGCACGGCAGTGGAGCGAAACAGCTTGAACATGCTCAAGGATATAGTTTTGTGTGGAGGAGATGTCAGAACACCCGGAAGCAATGGAAGCACGGCACTGCATGTTGCAGTTTCTAAAGGAAATGTGGATATTGTGAAGTACCTTTTGGATTGTGGGGCTGACATAGACAAACGGGATTCGAAAGGTTTTACCCCAAGGGAGCTAGCCGACCAACAAGAACATGAGGACATCAAAGCACTTTTCCTTACCAGAAAGCCAGGGACTGATTCTATTGTTTCCACTCCGGAGAACAAAGACTTGATTCTATAA 1956 0.4274 MSQPSEEKIPLLRDGILHSLGTRRNTRGELRRFILSPYHRRYRIWDTFLNVLAIYTAWVSPFEFGFLQEPTRPLSITDNMVNGIFAVDIFLTFFVAYLDKATNLLVDDPKMIARNYAIWFLIDAINSIPLELAMKIAPSKLRPYVSLINMFRLFRLRRVCALFSRLEEDMNYNYFSVRFAKLVCVTLFTVHLFACCYHLFGDAQCLDESLWISYVTSIYWSTTTLTTVGYGDLHPENTGEMIFDIFYMLFNMALDAYLIGNMTNLVVRWTSRTRRFRDTIQAASKFAERNGLSGILRDQMQEHICLKFKIDSEGLQQQETLDSLPKDIRSRISHHLFKDQVKNAYLFREVSKDLLSQLVSEIKAEYFLPGEVVIWQHEVPTHFYILASGAADFLVQTETELPDPEQTELPVREQTDLLVNENHLKKLDTLNDILVKTENILERGRMEIPLTLCFAVGRGHEFLLRQLLKKGLYPNESDNKGRTALHMAASKGSKNCVKLLLHYGADPNIKDTEGHVPLWEALVAGHESVTRILADGGAMLENGDSGHFACTAVERNSLNMLKDIVLCGGDVRTPGSNGSTALHVAVSKGNVDIVKYLLDCGADIDKRDSKGFTPRELADQQEHEDIKALFLTRKPGTDSIVSTPENKDLIL* 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02358 651 Gene3D - 448 631 IPR036770 -
Pte1g02358 651 Gene3D - 44 267 - -
Pte1g02358 651 SMART ANK_2a 513 542 IPR002110 GO:0005515
Pte1g02358 651 SMART ANK_2a 445 476 IPR002110 GO:0005515
Pte1g02358 651 SMART ANK_2a 577 606 IPR002110 GO:0005515
Pte1g02358 651 SMART ANK_2a 480 509 IPR002110 GO:0005515
Pte1g02358 651 Pfam Ankyrin repeats (3 copies) 452 511 IPR002110 GO:0005515
Pte1g02358 651 Pfam Ankyrin repeats (3 copies) 552 630 IPR002110 GO:0005515
Pte1g02358 651 SUPERFAMILY Voltage-gated potassium channels 37 268 - -
Pte1g02358 651 SUPERFAMILY Ankyrin repeat 451 632 IPR036770 -
Pte1g02358 651 PANTHER POTASSIUM CHANNEL AKT1 18 397 IPR045319 GO:0005249|GO:0006813
Pte1g02358 651 PRINTS Ankyrin repeat signature 481 496 IPR002110 GO:0005515
Pte1g02358 651 PRINTS Ankyrin repeat signature 593 607 IPR002110 GO:0005515
Pte1g02358 651 ProSiteProfiles Ankyrin repeat profile. 577 609 IPR002110 GO:0005515
Pte1g02358 651 Gene3D Jelly Rolls 314 432 IPR014710 -
Pte1g02358 651 SMART cnmp_10 346 482 IPR000595 -
Pte1g02358 651 PRINTS EAG/ELK/ERG potassium channel family signature 258 267 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte1g02358 651 PRINTS EAG/ELK/ERG potassium channel family signature 78 88 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte1g02358 651 PRINTS EAG/ELK/ERG potassium channel family signature 55 62 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte1g02358 651 PRINTS EAG/ELK/ERG potassium channel family signature 214 231 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte1g02358 651 PRINTS EAG/ELK/ERG potassium channel family signature 240 251 IPR003938 GO:0005249|GO:0006813|GO:0016020
Pte1g02358 651 ProSiteProfiles Ankyrin repeat region circular profile. 480 511 - -
Pte1g02358 651 CDD CAP_ED 346 398 IPR000595 -
Pte1g02358 651 ProSiteProfiles Ankyrin repeat profile. 480 512 IPR002110 GO:0005515
Pte1g02358 651 Pfam Ion transport protein 43 273 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Pte1g02358 651 FunFam Potassium channel KAT3 44 268 - -
Pte1g02358 651 ProSiteProfiles Ankyrin repeat region circular profile. 577 608 - -
Pte1g02358 651 ProSiteProfiles cAMP/cGMP binding motif profile. 346 400 IPR000595 -
Pte1g02358 651 SUPERFAMILY cAMP-binding domain-like 271 395 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02358 Pte-Chr1 44367498 44373794 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02358 15 650 Ion Channels AT4G32500 49.858 0.0 639
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02358 K21867 - csv:101220784 756.133
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pte1g02358 1 44367498 44373794 Pte1g02358 1 44367498 44373794 RCT