Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pte1g02348 ATGGGGCCATACGATTCTGCTACCTCCACCATTAGCAGCAATGGTAATTCTTCCTCTTCTTCCTCCTCAGACAAACAAGTTGAGCAGGACATCGATGGACATCTTGCTGGTGCTGGATACAAAGTACGTGCTTCTGAGCTCCTTCAAGTTGCCCAGCGCCTTGCACGTTTGGAAAACGCTATGGCCAATACCAACGGTGAGATTTCACAGTTGGCTTCGGATGCCGTCCATTACAACCCTTCTGATATTGCTTCCAGGGTTGACTCGCTCCTCTCTGAGTTAAACCAGACTAACTCCTTACCGTCCGATCTTGTCACGGGTCTCACGTTGAATCATATAGATATTTCAGTCCATGATAACTGGATGTACCCTAATACTATGGATTATACGCCGGTTCCACAACTGCAGCAGCAGCAATTTACGATTGTGACGGCTGTGGAAGAAGATTCGGGCATTCAGTTGGTGCACATGCTCATGACCTGTGCGGGCTCTCTCCAACGTGGCGAATTAGCATTAGCTGGTTCCTTGATCGATGACATGCAACGGCTTCTGACTCGTGTCGACACCACTTCCGGCATCGGCAAAGTTGCTGGCTATTTCATTGACGCACTGAGCCGTCGCATCTTTTCGCCACATGGTGCCGCCAACTACACGGCTGGCACACCTTATGAAAACGAAATTCTCTACCACCATTTCTACGAAGCCTGTCCATACCTGAAATTCGCTCACTTCACTGCAAACCAGGCCATCCTCGAAGCCTTCAATGGCCATGATTGCGTCCACGTTATTGATTTCAACCTCATGCACGGACTGCAATGGCCGGCTCTCATCCAGGCGCTAGCATTACGTCCTGGCGGGCCTCCGACTCTGCGATTGACAGGCATTGGACCACCCTGTCCAGACGGGCGTGACTCGCTTCGTGAAATCGGATTGCGACTGGCAGAGTTGGCAAGATCCGTCAACGTAAAATTCAACTTCCGTGGAGTGGCGGCCTCGCGCCTTGAAGATGTGAAGCCTTGGATGCTTCAAATCAGAGCTCAAGAAGCGGTAGCAGTAAACTCAATCATGCAACTCCACCGTCTAATCGGGAATGAACCTGTTCGAAATTCAGCCATTGATATGGTACTCGGGTGGATCAGAACGCTGAACCCGAAAATCATGACGGTCATTGAGCAAGAAGCTAACCACAATCAACCGAGTTTCCTGGACCGTTTCATCGAGGCTCTCTACTATTATTCAACTATGTTCGACTCACTGGAATCATGTCCACTGCAACCAGAAAAAGCTTTGGCTGAGATTTACATCCAAAGAGAGGTATGTAATGTTGTTTGCTGTGAAGGAACTGGAAGAATGGAGAGGCACGAACCGCTTGTTATGTGGAGGGATCGACTTGTAAAAGCTGGGTTCAAACCTCTGCATCTGGGTTCGAATGCATTCAAGCAAGCAAGTATGCTGTTGAGTCTGTTTTCGGCCGAGGGTTACTGTGTTGAAGAAGTAGAAGGGTGTTTGACCTTAGGGTGGCACAGCCGGCCTCTCCTCGCCGCTTCGGCTTGGCAGGCGGCGCCCGCACCGGATACGAATGAAGCAGCGTTTGGAAAGATAGGCAATCAGAGTAATAATTACGGGGGGGGTGATGGTAACCATTTATTGTAA 1653 0.4979 MGPYDSATSTISSNGNSSSSSSSDKQVEQDIDGHLAGAGYKVRASELLQVAQRLARLENAMANTNGEISQLASDAVHYNPSDIASRVDSLLSELNQTNSLPSDLVTGLTLNHIDISVHDNWMYPNTMDYTPVPQLQQQQFTIVTAVEEDSGIQLVHMLMTCAGSLQRGELALAGSLIDDMQRLLTRVDTTSGIGKVAGYFIDALSRRIFSPHGAANYTAGTPYENEILYHHFYEACPYLKFAHFTANQAILEAFNGHDCVHVIDFNLMHGLQWPALIQALALRPGGPPTLRLTGIGPPCPDGRDSLREIGLRLAELARSVNVKFNFRGVAASRLEDVKPWMLQIRAQEAVAVNSIMQLHRLIGNEPVRNSAIDMVLGWIRTLNPKIMTVIEQEANHNQPSFLDRFIEALYYYSTMFDSLESCPLQPEKALAEIYIQREVCNVVCCEGTGRMERHEPLVMWRDRLVKAGFKPLHLGSNAFKQASMLLSLFSAEGYCVEEVEGCLTLGWHSRPLLAASAWQAAPAPDTNEAAFGKIGNQSNNYGGGDGNHLL* 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pte1g02348 550 MobiDBLite consensus disorder prediction 1 26 - -
Pte1g02348 550 Pfam GRAS domain family 154 519 IPR005202 -
Pte1g02348 550 Coils Coil 47 74 - -
Pte1g02348 550 MobiDBLite consensus disorder prediction 1 28 - -
Pte1g02348 550 Gene3D - 30 94 IPR038088 -
Pte1g02348 550 ProSiteProfiles GRAS family profile. 145 519 IPR005202 -
Pte1g02348 550 SMART DELLA_2 32 104 - -
Pte1g02348 550 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 111 515 IPR005202 -
Pte1g02348 550 Pfam Transcriptional regulator DELLA protein N terminal 32 98 IPR021914 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pte1g02348 Pte-Chr1 44334819 44336880 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pte1g02348 31 519 GRAS Transcription Factor Family AT1G14920 47.500 1.12e-158 461
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pte1g02348 GRAS 5.4e-122 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pte1g02348 K14494 - qsa:O6P43_002319 771.926